About lab
SBML Level 2 code generated for the JWS Online project by Jacky Snoep using PySCeS . It can be used to explore systemsbiology rohwer2001 sucrose BioModels0000000023 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagerohwer2001-sucrose-lab
Created2026-05-17
Updated2026-05-17
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_atp",
"label": "Initial Model State ATP",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.initial_model_state_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ATP`."
},
{
"name": "initial_model_state_adp",
"label": "Initial Model State ADP",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.initial_model_state_adp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ADP`."
},
{
"name": "initial_glycolysis",
"label": "Initial Glycolysis",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.initial_glycolysis",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `glycolysis`."
},
{
"name": "initial_phos",
"label": "Initial Phos",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.initial_phos",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `phos`."
},
{
"name": "initial_glcex",
"label": "Initial Glcex",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.initial_glcex",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Glcex`."
},
{
"name": "initial_fruex",
"label": "Initial Fruex",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.initial_fruex",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Fruex`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.species_labels"
},
{
"name": "atp",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.atp"
},
{
"name": "adp",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.adp"
},
{
"name": "glycolysis",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.glycolysis"
},
{
"name": "phos",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.phos"
},
{
"name": "glcex",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.glcex"
},
{
"name": "fruex",
"maps_to": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.fruex"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Rohwer2001 Sucrose Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model",
"alias": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model_state"
],
"from": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model_summary"
],
"from": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model_species_labels"
],
"from": "systemsbiology_sbml_rohwer2001_sucrose_biomd0000000023_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "SBML Level 2 code generated for the JWS Online project by Jacky Snoep using PySCeS . It can be used to explore systemsbiology rohwer2001 sucrose BioModels0000000023 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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