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Phosphatase activities on PI(3,4,5)P3 and PI(3,4)P2 Lab

About lab

Clean Biosimulant lab for systems signaling model: Phosphatase activities on PI(3,4,5)P3 and PI(3,4)P2. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagephosphatase-activities-on-pi-3-4-5-p3-and-pi-3-4-p2-lab
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicellular-signalingvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_egf_sig_level",
        "label": "EGF Sig",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.initial_egf_sig_level",
        "description": "EGF Sig source parameter. Maps to SBML symbol `EGF_sig` and preserves the bundled default."
      },
      {
        "name": "initial_for_egf_sig_level",
        "label": "Initial For EGF Sig",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.initial_for_egf_sig_level",
        "description": "Initial For EGF Sig source parameter. Maps to SBML symbol `ModelValue_13` and preserves the bundled default."
      },
      {
        "name": "initial_inpp4ab",
        "label": "Initial INPP4AB",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.initial_inpp4ab",
        "description": "Initial level of INPP4AB. Maps to SBML symbol `INPP4AB`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "egf",
        "label": "EGF",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.egf",
        "description": "EGF. Maps to SBML symbol `EGF` and is emitted in native SBML units."
      },
      {
        "name": "egfr",
        "label": "EGFR",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.egfr",
        "description": "EGFR. Maps to SBML symbol `EGFR` and is emitted in native SBML units."
      },
      {
        "name": "egfr_p",
        "label": "EGFR P",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.egfr_p",
        "description": "EGFR P. Maps to SBML symbol `EGFR_P` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "cellular-signaling"
  ],
  "title": "Phosphatase activities on PI(3,4,5)P3 and PI(3,4)P2 Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model",
      "alias": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model_state"
      ],
      "from": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model_summary"
      ],
      "from": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model_species_labels"
      ],
      "from": "signaling_sbml_phosphatase_activities_on_pi_3_4_5_p3_and_pi_3_4_model1704190000_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for systems signaling model: Phosphatase activities on PI(3,4,5)P3 and PI(3,4)P2. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

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