BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Bedessem2014 - HiF-1 a -mediated response to hypoxia on the G1/S transition Lab

About lab

Single-model lab wrapper for Bedessem2014 - HiF-1 a -mediated response to hypoxia on the G1/S transition. Cell Cycle Bedessem2014Hif1AMediated Response To Hypoxi Model1812040001Model represents core biological mechanisms from biomodels_ebi reference biomodels_ebi:MODEL1812040001. When you run it, you can inspect state and compare temporal behavior between baseline and adjusted inputs.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagebedessem2014-hif-1-a-mediated-response-to-hypoxia-on-the-g1-s-tr
Created2026-05-15
Updated2026-05-15
cellcyclesbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "model_state_m_m",
        "label": "Model state M (m)",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.model_state_m_m",
        "description": "Tracks Model state M (m) in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.model_state_m_m`."
      },
      {
        "name": "cyclin_d",
        "label": "Cyclin D",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.cyclin_d",
        "description": "Tracks Cyclin D in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.cyclin_d`."
      },
      {
        "name": "rb_tumor_suppressor",
        "label": "Rb tumor suppressor",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.rb_tumor_suppressor",
        "description": "Tracks Rb tumor suppressor in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.rb_tumor_suppressor`."
      },
      {
        "name": "cyclin_e",
        "label": "Cyclin E",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.cyclin_e",
        "description": "Tracks Cyclin E in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.cyclin_e`."
      },
      {
        "name": "scf_ubiquitin_ligase",
        "label": "SCF ubiquitin ligase",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.scf_ubiquitin_ligase",
        "description": "Tracks SCF ubiquitin ligase in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.scf_ubiquitin_ligase`."
      },
      {
        "name": "e2f_transcription_factor",
        "label": "E2F transcription factor",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.e2f_transcription_factor",
        "description": "Tracks E2F transcription factor in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.e2f_transcription_factor`."
      },
      {
        "name": "e2f_a",
        "label": "E2F A",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.e2f_a",
        "description": "Tracks E2F A in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.e2f_a`."
      },
      {
        "name": "e2f_rb",
        "label": "E2F Rb",
        "maps_to": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.e2f_rb",
        "description": "Tracks E2F Rb in the lab model via `cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.e2f_rb`."
      }
    ]
  },
  "title": "Bedessem2014 - HiF-1 a -mediated response to hypoxia on the G1/S transition Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model",
      "alias": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model_state"
      ],
      "from": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model_summary"
      ],
      "from": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model_species_labels"
      ],
      "from": "cellcycle_sbml_bedessem2014_hif_1_a_mediated_response_to_hypoxi_model1812040001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Bedessem2014 - HiF-1 a -mediated response to hypoxia on the G1/S transition. Cell Cycle Bedessem2014Hif1AMediated Response To Hypoxi Model1812040001Model represents core biological mechanisms from biomodels_ebi reference biomodels_ebi:MODEL1812040001. When you run it, you can inspect state and compare temporal behavior between baseline and adjusted inputs.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.