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Cortes2019 Optimality Of The Spontaneous Prophage Induction Rate Lab

About lab

Optimality of the spontaneous prophage induction rate.Cortes MG1, Krog J2, Balázsi G3.1 Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, USA.2 The Louis. It can be used to explore systemsbiology cortes2019 optimality of the spontaneous dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagecortes2019-optimality-of-the-spontaneous-prophage-induction-rate
Created2026-05-17
Updated2026-05-17
cellcyclesystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_u",
        "label": "Initial Model State U",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.initial_model_state_u",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `U`."
      },
      {
        "name": "initial_model_state_l",
        "label": "Initial Model State L",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.initial_model_state_l",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `L`."
      },
      {
        "name": "initial_model_state_v",
        "label": "Initial Model State V",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.initial_model_state_v",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `V`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.species_labels"
      },
      {
        "name": "model_state_u",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.model_state_u"
      },
      {
        "name": "model_state_l",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.model_state_l"
      },
      {
        "name": "model_state_v",
        "maps_to": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.model_state_v"
      }
    ]
  },
  "tags": [
    "cellcycle",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Cortes2019 Optimality Of The Spontaneous Prophage Induction Rate Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model",
      "alias": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model_state"
      ],
      "from": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model_summary"
      ],
      "from": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model_species_labels"
      ],
      "from": "systemsbiology_sbml_cortes2019_optimality_of_the_spontaneous_prophag_biomd0000000884_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Optimality of the spontaneous prophage induction rate.Cortes MG1, Krog J2, Balázsi G3.1 Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, USA.2 The Louis. It can be used to explore systemsbiology cortes2019 optimality of the spontaneous dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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