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Gulbudak2019.1 - Heterogeneous viral strategies promote coexistence in virus-microbe systems (Lytic) Lab

About lab

Curated microbiology lab for Gulbudak2019.1 - Heterogeneous viral strategies promote coexistence in virus-microbe systems (Lytic). The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.

Runtime

Duration10
Comms Step0.01

Runs

Total0
Completed0
Failed0

Metadata

Packagegulbudak2019-1-heterogeneous-viral-strategies-promote-coexistenc
Created2026-05-15
Updated2026-05-15
microbiologysbmlbiomodels_ebifaithfultelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "infection_rate",
        "maps_to": "gulbudak2019_viral_strategy_l.infection_rate"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "gulbudak2019_viral_strategy_l.state"
      },
      {
        "name": "summary",
        "maps_to": "gulbudak2019_viral_strategy_l.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "gulbudak2019_viral_strategy_l.species_labels"
      },
      {
        "name": "susceptible_hosts",
        "maps_to": "gulbudak2019_viral_strategy_l.susceptible_hosts"
      },
      {
        "name": "infected_hosts",
        "maps_to": "gulbudak2019_viral_strategy_l.infected_hosts"
      },
      {
        "name": "free_lytic_virus",
        "maps_to": "gulbudak2019_viral_strategy_l.free_lytic_virus"
      }
    ]
  },
  "title": "Gulbudak2019.1 - Heterogeneous viral strategies promote coexistence in virus-microbe systems (Lytic) Lab",
  "models": [
    {
      "path": "owned/models/gulbudak2019_viral_strategy_l",
      "alias": "gulbudak2019_viral_strategy_l",
      "provenance": {
        "owned_path": "owned/models/gulbudak2019_viral_strategy_l"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.gulbudak2019_viral_strategy_l_state"
      ],
      "from": "gulbudak2019_viral_strategy_l.state"
    },
    {
      "to": [
        "visualisation.gulbudak2019_viral_strategy_l_summary"
      ],
      "from": "gulbudak2019_viral_strategy_l.summary"
    },
    {
      "to": [
        "visualisation.gulbudak2019_viral_strategy_l_species_labels"
      ],
      "from": "gulbudak2019_viral_strategy_l.species_labels"
    },
    {
      "to": [
        "visualisation.gulbudak2019_viral_strategy_l_susceptible_hosts"
      ],
      "from": "gulbudak2019_viral_strategy_l.susceptible_hosts"
    },
    {
      "to": [
        "visualisation.gulbudak2019_viral_strategy_l_infected_hosts"
      ],
      "from": "gulbudak2019_viral_strategy_l.infected_hosts"
    },
    {
      "to": [
        "visualisation.gulbudak2019_viral_strategy_l_free_lytic_virus"
      ],
      "from": "gulbudak2019_viral_strategy_l.free_lytic_virus"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Curated microbiology lab for Gulbudak2019.1 - Heterogeneous viral strategies promote coexistence in virus-microbe systems (Lytic). The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
  "schema_version": "2.0"
}

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