Dong2018 - E2F dynamics in G1 phase Lab

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "myc",
        "label": "Myc",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.myc",
        "description": "Tracks Myc in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.myc`."
      },
      {
        "name": "model_state_s",
        "label": "Model state S",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_s",
        "description": "Tracks Model state S in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_s`."
      },
      {
        "name": "phosphorylated_e2f",
        "label": "Phosphorylated E2F",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.phosphorylated_e2f",
        "description": "Tracks Phosphorylated E2F in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.phosphorylated_e2f`."
      },
      {
        "name": "e2f_m_rna",
        "label": "E2F mRNA",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.e2f_m_rna",
        "description": "Tracks E2F mRNA in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.e2f_m_rna`."
      },
      {
        "name": "rb",
        "label": "Rb",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.rb",
        "description": "Tracks Rb in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.rb`."
      },
      {
        "name": "model_state_re",
        "label": "Model state RE",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_re",
        "description": "Tracks Model state RE in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_re`."
      },
      {
        "name": "model_state_r_r",
        "label": "Model state R (R)",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_r_r",
        "description": "Tracks Model state R (R) in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_r_r`."
      },
      {
        "name": "model_state_cd",
        "label": "Model state CD",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_cd",
        "description": "Tracks Model state CD in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_cd`."
      },
      {
        "name": "model_state_ce",
        "label": "Model state CE",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_ce",
        "description": "Tracks Model state CE in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_ce`."
      },
      {
        "name": "model_state_rp",
        "label": "Model state RP",
        "maps_to": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_rp",
        "description": "Tracks Model state RP in the lab model via `cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.model_state_rp`."
      }
    ]
  },
  "title": "Dong2018 - E2F dynamics in G1 phase Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model",
      "alias": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model_state"
      ],
      "from": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model_summary"
      ],
      "from": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model_species_labels"
      ],
      "from": "cellcycle_sbml_dong2018_e2f_dynamics_in_g1_phase_model1811050001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Dong2018 - E2F dynamics in G1 phase. The length of the G1 phase in the cell cycle shows significant variability in different cell types and tissue types. To gain insights into the control of G1 length, we generated an E2F activity report.",
  "schema_version": "2.0"
}