About lab
This is a model with 20 cells - 20 cytplasms and 21 apoplasts - as described in the article: Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study. It can be used to explore systemsbiology twycross2010 auxin transport model1005200000 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagetwycross2010-auxin-transport-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
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"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ext`."
},
{
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"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `c9`."
},
{
"name": "initial_model_state_c8",
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"maps_to": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model.initial_model_state_c8",
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},
{
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},
{
"name": "initial_model_state_c6",
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"maps_to": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model.initial_model_state_c6",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `c6`."
},
{
"name": "initial_model_state_c5",
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"maps_to": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model.initial_model_state_c5",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `c5`."
}
],
"outputs": [
{
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"maps_to": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model.state"
},
{
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{
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{
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{
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},
{
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{
"name": "model_state_c6",
"maps_to": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model.model_state_c6"
},
{
"name": "model_state_c5",
"maps_to": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model.model_state_c5"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Twycross2010 Auxin Transport Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model",
"alias": "systemsbiology_sbml_twycross2010_auxin_transport_model1005200000_model",
"provenance": {
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{
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}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This is a model with 20 cells - 20 cytplasms and 21 apoplasts - as described in the article: Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study. It can be used to explore systemsbiology twycross2010 auxin transport model1005200000 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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