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Aguilera2017 Constitutive Gene Expression Lab

About lab

constitutive mRNA/protein expression. Model destription:The model describes the stochastic dynamics of two variables, protein and mRNA of a gene with constitutive expression. Publication:A New Efficient Approach to Fit Stochastic Models o.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packageaguilera2017-constitutive-gene-expression-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "messenger_rna",
        "maps_to": "aguilera2017_constitutive_gene_expression.messenger_rna"
      },
      {
        "name": "protein",
        "maps_to": "aguilera2017_constitutive_gene_expression.protein"
      },
      {
        "name": "state",
        "maps_to": "aguilera2017_constitutive_gene_expression.state"
      },
      {
        "name": "summary",
        "maps_to": "aguilera2017_constitutive_gene_expression.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "aguilera2017_constitutive_gene_expression.species_labels"
      }
    ]
  },
  "title": "Aguilera2017 Constitutive Gene Expression Lab",
  "models": [
    {
      "path": "owned/models/aguilera2017_constitutive_gene_expression",
      "alias": "aguilera2017_constitutive_gene_expression",
      "parameters": {
        "model_path": "data/MODEL1608100000.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/aguilera2017_constitutive_gene_expression"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.aguilera2017_constitutive_gene_expression_messenger_rna"
      ],
      "from": "aguilera2017_constitutive_gene_expression.messenger_rna"
    },
    {
      "to": [
        "visualisation.aguilera2017_constitutive_gene_expression_protein"
      ],
      "from": "aguilera2017_constitutive_gene_expression.protein"
    },
    {
      "to": [
        "visualisation.aguilera2017_constitutive_gene_expression_state"
      ],
      "from": "aguilera2017_constitutive_gene_expression.state"
    },
    {
      "to": [
        "visualisation.aguilera2017_constitutive_gene_expression_summary"
      ],
      "from": "aguilera2017_constitutive_gene_expression.summary"
    },
    {
      "to": [
        "visualisation.aguilera2017_constitutive_gene_expression_species_labels"
      ],
      "from": "aguilera2017_constitutive_gene_expression.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "constitutive mRNA/protein expression. Model destription:The model describes the stochastic dynamics of two variables, protein and mRNA of a gene with constitutive expression. Publication:A New Efficient Approach to Fit Stochastic Models o.",
  "schema_version": "2.0"
}

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