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Egli2004 - Rhythmic Secretion Prolactin Rats Action Oxytocin Lab

About lab

Source-faithful physiology lab for Egli, Bertram, Sellix, Freeman, 2004. Public controls and outputs are mapped to real source symbols for source-model physiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packageegli2004-rhythmic-secretion-prolactin-rats-action-oxytocin-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_dopamine",
        "label": "Initial Dopamine",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.initial_dopamine",
        "description": "Initial value for Dopamine. Maps to source symbol `DA`. Units: nanog_ml. Naming evidence: source metadata names `DA` as `dopamine`.",
        "accepted_units": [
          "nanog_ml"
        ]
      },
      {
        "name": "initial_oxytocin",
        "label": "Initial Oxytocin",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.initial_oxytocin",
        "description": "Initial value for Oxytocin. Maps to source symbol `OT`. Units: picog_ml. Naming evidence: source metadata names `OT` as `oxytocin`.",
        "accepted_units": [
          "picog_ml"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.variable_labels"
      },
      {
        "name": "dopamine",
        "label": "Dopamine",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.dopamine",
        "description": "Dopamine. Maps to source symbol `DA`. Units: nanog_ml. Naming evidence: source metadata names `DA` as `dopamine`."
      },
      {
        "name": "oxytocin",
        "label": "Oxytocin",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.oxytocin",
        "description": "Oxytocin. Maps to source symbol `OT`. Units: picog_ml. Naming evidence: source metadata names `OT` as `oxytocin`."
      },
      {
        "name": "prolactin",
        "label": "Prolactin",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.prolactin",
        "description": "Prolactin. Maps to source symbol `PRL`. Units: nanog_ml. Naming evidence: source metadata names `PRL` as `prolactin`."
      },
      {
        "name": "da_infinity",
        "label": "Da Infinity",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.da_infinity",
        "description": "Da Infinity. Maps to source symbol `DA_infinity`. Units: nanog_ml. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "model_variable_k_d",
        "label": "Model Variable K D (source kD)",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.model_variable_k_d",
        "description": "Model Variable K D (source kD). Maps to source symbol `kD`. Units: nanog_ml. Naming evidence: source symbol is too ambiguous for a stronger public label."
      },
      {
        "name": "model_variable_k_o",
        "label": "Model Variable K O (source kO)",
        "maps_to": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.model_variable_k_o",
        "description": "Model Variable K O (source kO). Maps to source symbol `kO`. Units: picog_ml. Naming evidence: source symbol is too ambiguous for a stronger public label."
      }
    ]
  },
  "title": "Egli2004 - Rhythmic Secretion Prolactin Rats Action Oxytocin Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model",
      "alias": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model",
      "parameters": {
        "model_path": "data/egli_bertram_sellix_freeman_2004.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model_state"
      ],
      "from": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model_summary"
      ],
      "from": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model_trajectory"
      ],
      "from": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model_variable_labels"
      ],
      "from": "physiology_cellml_egli_bertram_sellix_freeman_2004_eglibertramsellixfreeman2004_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Egli, Bertram, Sellix, Freeman, 2004. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}

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