About lab
This is the general model without delay described by the equation system (1) in: A model of HIV-1 pathogenesis that includes an intracellular delay. Nelson PW, Murray JD, Perelson AS; Math Biosci.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagenelson2000-hiv-1-general-model-1-lab
Created2026-05-17
Updated2026-05-17
epidemiologygeneregulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_v_i",
"label": "Initial Model State V I",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.initial_model_state_v_i",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `V_I`."
},
{
"name": "initial_model_state_t",
"label": "Initial Model State T",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.initial_model_state_t",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `T_i`."
},
{
"name": "initial_v_ni",
"label": "Initial V Ni",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.initial_v_ni",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `V_NI`."
},
{
"name": "initial_model_state_t_2",
"label": "Initial Model State T 2",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.initial_model_state_t_2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `T`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.species_labels"
},
{
"name": "v_i",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.v_i"
},
{
"name": "model_state_t",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.model_state_t"
},
{
"name": "v_ni",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.v_ni"
},
{
"name": "model_state_t_2",
"maps_to": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.model_state_t_2"
}
]
},
"tags": [
"epidemiology",
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Nelson2000 Hiv 1 General Model 1 Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model",
"alias": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model_state"
],
"from": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model_summary"
],
"from": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model_species_labels"
],
"from": "systemsbiology_sbml_nelson2000_hiv_1_general_model_1_biomd0000000875_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This is the general model without delay described by the equation system (1) in: A model of HIV-1 pathogenesis that includes an intracellular delay. Nelson PW, Murray JD, Perelson AS; Math Biosci.",
"schema_version": "2.0"
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