About lab
Source-faithful physiology lab for Wang, Sobie, 2008. Public controls and outputs are mapped to real source symbols for electrophysiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
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Completed0
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Metadata
Packagewang2008-mathematical-neonatal-mouse-ventricular-action-potentia
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_membrane_voltage",
"label": "Initial Membrane Voltage",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.initial_membrane_voltage",
"description": "Initial value for Membrane Voltage. Maps to source symbol `V`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"millivolt"
]
},
{
"name": "initial_calcium_conductance",
"label": "Initial Calcium Conductance",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.initial_calcium_conductance",
"description": "Initial value for Calcium Conductance. Maps to source symbol `g`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.variable_labels"
},
{
"name": "eta",
"label": "Eta",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.eta",
"description": "Eta. Maps to source symbol `eta`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "k_m_ca",
"label": "K M Ca",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.k_m_ca",
"description": "K M Ca. Maps to source symbol `K_mCa`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "k_m_na",
"label": "K M Na",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.k_m_na",
"description": "K M Na. Maps to source symbol `K_mNa`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "k_na_ca",
"label": "K Na Ca",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.k_na_ca",
"description": "K Na Ca. Maps to source symbol `k_NaCa`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "sodium_current_i_na_ca",
"label": "Sodium Current I Na Ca",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.sodium_current_i_na_ca",
"description": "Sodium Current I Na Ca. Maps to source symbol `i_NaCa`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "calcium_current_i_cl_ca",
"label": "Calcium Current I Cl Ca",
"maps_to": "physiology_cellml_wang_sobie_2008_650_model.calcium_current_i_cl_ca",
"description": "Calcium Current I Cl Ca. Maps to source symbol `i_ClCa`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Wang2008 - Mathematical Neonatal Mouse Ventricular Action Potential Lab",
"models": [
{
"path": "owned/models/physiology_cellml_wang_sobie_2008_650_model",
"alias": "physiology_cellml_wang_sobie_2008_650_model",
"parameters": {
"model_path": "data/wang_sobie_2008.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_wang_sobie_2008_650_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_wang_sobie_2008_650_model_state"
],
"from": "physiology_cellml_wang_sobie_2008_650_model.state"
},
{
"to": [
"visualisation.physiology_cellml_wang_sobie_2008_650_model_summary"
],
"from": "physiology_cellml_wang_sobie_2008_650_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_wang_sobie_2008_650_model_trajectory"
],
"from": "physiology_cellml_wang_sobie_2008_650_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_wang_sobie_2008_650_model_variable_labels"
],
"from": "physiology_cellml_wang_sobie_2008_650_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for Wang, Sobie, 2008. Public controls and outputs are mapped to real source symbols for electrophysiology.",
"schema_version": "2.0"
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