Rehm2006 Caspase Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_cytochrome_c_in_mitochondrium",
        "label": "Initial Cytochrome C In Mitochondrium",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.initial_cytochrome_c_in_mitochondrium",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CytC_mit`."
      },
      {
        "name": "initial_smac_in_mitochondrium",
        "label": "Initial Smac In Mitochondrium",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.initial_smac_in_mitochondrium",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `SMAC_mito`."
      },
      {
        "name": "initial_casp3_substrate",
        "label": "Initial Casp3 Substrate",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.initial_casp3_substrate",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Substrate`."
      },
      {
        "name": "initial_pro_casp3",
        "label": "Initial Pro Casp3",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.initial_pro_casp3",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PC3`."
      },
      {
        "name": "initial_pro_casp9",
        "label": "Initial Pro Casp9",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.initial_pro_casp9",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PC9`."
      },
      {
        "name": "initial_cytosolic_cytochrome_c",
        "label": "Initial Cytosolic Cytochrome C",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.initial_cytosolic_cytochrome_c",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CytC_cell`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.species_labels"
      },
      {
        "name": "cytochrome_c_in_mitochondrium",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.cytochrome_c_in_mitochondrium"
      },
      {
        "name": "smac_in_mitochondrium",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.smac_in_mitochondrium"
      },
      {
        "name": "casp3_substrate",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.casp3_substrate"
      },
      {
        "name": "pro_casp3",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.pro_casp3"
      },
      {
        "name": "pro_casp9",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.pro_casp9"
      },
      {
        "name": "cytosolic_cytochrome_c",
        "maps_to": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.cytosolic_cytochrome_c"
      }
    ]
  },
  "tags": [
    "pharmacology",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Rehm2006 Caspase Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model",
      "alias": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model_state"
      ],
      "from": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model_summary"
      ],
      "from": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model_species_labels"
      ],
      "from": "systemsbiology_sbml_rehm2006_caspase_biomd0000000256_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This is the standard model described in the article: Systems analysis of effector caspase activation and its control by X-linked inhibitor of apoptosis protein. Rehm M, Huber HJ, Dussmann H, Prehn JH.",
  "schema_version": "2.0"
}