Locke2005 Circadian Clock Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_toc1_protein_in_cytoplasm",
        "label": "Initial Toc1 Protein In Cytoplasm",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.initial_toc1_protein_in_cytoplasm",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cTc`."
      },
      {
        "name": "initial_x_protein_in_cytoplasm",
        "label": "Initial X Protein In Cytoplasm",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.initial_x_protein_in_cytoplasm",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cXc`."
      },
      {
        "name": "initial_light_sensitive_protein_p",
        "label": "Initial Light Sensitive Protein P",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.initial_light_sensitive_protein_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cPn`."
      },
      {
        "name": "initial_lhy_mrna",
        "label": "Initial Lhy MRNA",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.initial_lhy_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cLm`."
      },
      {
        "name": "initial_toc1_mrna",
        "label": "Initial Toc1 MRNA",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.initial_toc1_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cTm`."
      },
      {
        "name": "initial_x_protein_in_nucleus",
        "label": "Initial X Protein In Nucleus",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.initial_x_protein_in_nucleus",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cXn`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.species_labels"
      },
      {
        "name": "toc1_protein_in_cytoplasm",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.toc1_protein_in_cytoplasm"
      },
      {
        "name": "x_protein_in_cytoplasm",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.x_protein_in_cytoplasm"
      },
      {
        "name": "light_sensitive_protein_p",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.light_sensitive_protein_p"
      },
      {
        "name": "lhy_mrna",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.lhy_mrna"
      },
      {
        "name": "toc1_mrna",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.toc1_mrna"
      },
      {
        "name": "x_protein_in_nucleus",
        "maps_to": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.x_protein_in_nucleus"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Locke2005 Circadian Clock Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model",
      "alias": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model_state"
      ],
      "from": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model_summary"
      ],
      "from": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model_species_labels"
      ],
      "from": "systemsbiology_sbml_locke2005_circadian_clock_biomd0000000055_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Locke2005 - Circadian Clock SBML model of the interlocked feedback loop network The model describes the circuit depicted in Fig. 4 and reproduces the simulations in Figure 5A and 5B.",
  "schema_version": "2.0"
}