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Yugi2014 - Insulin induced signalling (PFKL phosphorylation) - model 2 Lab

About lab

Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packageyugi2014-insulin-induced-signalling-pfkl-phosphorylation-model-2
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebimetabolic-signalinghormone-signalingvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_akt",
        "label": "Initial AKT",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.initial_akt",
        "description": "Initial level of AKT. Maps to SBML symbol `s28`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_f6p_proxy",
        "label": "Initial F6P Proxy",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.initial_f6p_proxy",
        "description": "Initial level of F6P Proxy. Maps to SBML symbol `s22`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_abstract_source_state_s34",
        "label": "Initial Abstract source state S34",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.initial_abstract_source_state_s34",
        "description": "Initial level of Abstract source state S34. Maps to SBML symbol `s34`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "insulin_receptor_complex",
        "label": "insulin receptor Complex",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.insulin_receptor_complex",
        "description": "insulin receptor Complex. Maps to SBML symbol `s23` and is emitted in native SBML units."
      },
      {
        "name": "pro_insulin_receptor_complex",
        "label": "Pro insulin receptor Complex",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.pro_insulin_receptor_complex",
        "description": "Pro insulin receptor Complex. Maps to SBML symbol `s24` and is emitted in native SBML units."
      },
      {
        "name": "p1ir_complex",
        "label": "P1ir Complex",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.p1ir_complex",
        "description": "P1ir Complex. Maps to SBML symbol `s25` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "metabolic-signaling",
    "hormone-signaling"
  ],
  "title": "Yugi2014 - Insulin induced signalling (PFKL phosphorylation) - model 2 Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model",
      "alias": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model_state"
      ],
      "from": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model_summary"
      ],
      "from": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model_species_labels"
      ],
      "from": "signaling_sbml_yugi2014_insulin_induced_signalling_pfkl_phospho_biomd0000000541_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

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