Barr2016 - All-or-nothing G1/S transition Lab

{
  "io": {
    "inputs": [
      {
        "name": "cyclin_et",
        "label": "Cyclin ET",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_et",
        "description": "Controls Cyclin ET in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_et`."
      },
      {
        "name": "cyclin_at",
        "label": "Cyclin AT",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_at",
        "description": "Controls Cyclin AT in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_at`."
      },
      {
        "name": "p27t",
        "label": "P27T",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.p27t",
        "description": "Controls P27T in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.p27t`."
      },
      {
        "name": "emi_model_state_c",
        "label": "Emi Model state C",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi_model_state_c",
        "description": "Controls Emi Model state C in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi_model_state_c`."
      },
      {
        "name": "emi1t",
        "label": "Emi1T",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1t",
        "description": "Controls Emi1T in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1t`."
      },
      {
        "name": "cdh1dp",
        "label": "Cdh1dp",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cdh1dp",
        "description": "Controls Cdh1dp in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cdh1dp`."
      }
    ],
    "outputs": [
      {
        "name": "cyclin_e",
        "label": "Cyclin E",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_e",
        "description": "Tracks Cyclin E in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_e`."
      },
      {
        "name": "cyclin_a",
        "label": "Cyclin A",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_a",
        "description": "Tracks Cyclin A in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_a`."
      },
      {
        "name": "cyclin_ep27",
        "label": "Cyclin Ep27",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_ep27",
        "description": "Tracks Cyclin Ep27 in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_ep27`."
      },
      {
        "name": "cyclin_ap27",
        "label": "Cyclin Ap27",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_ap27",
        "description": "Tracks Cyclin Ap27 in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cyclin_ap27`."
      },
      {
        "name": "skp2_ubiquitin_ligase_adaptor",
        "label": "Skp2 ubiquitin-ligase adaptor",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.skp2_ubiquitin_ligase_adaptor",
        "description": "Tracks Skp2 ubiquitin-ligase adaptor in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.skp2_ubiquitin_ligase_adaptor`."
      },
      {
        "name": "phosphorylated_cdh1",
        "label": "Phosphorylated Cdh1",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.phosphorylated_cdh1",
        "description": "Tracks Phosphorylated Cdh1 in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.phosphorylated_cdh1`."
      },
      {
        "name": "emi1_apc_c_inhibitor",
        "label": "Emi1 APC/C inhibitor",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1_apc_c_inhibitor",
        "description": "Tracks Emi1 APC/C inhibitor in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1_apc_c_inhibitor`."
      },
      {
        "name": "p27_cdk_inhibitor",
        "label": "p27 CDK inhibitor",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.p27_cdk_inhibitor",
        "description": "Tracks p27 CDK inhibitor in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.p27_cdk_inhibitor`."
      },
      {
        "name": "cdh1_apc_c_activator",
        "label": "Cdh1 APC/C activator",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cdh1_apc_c_activator",
        "description": "Tracks Cdh1 APC/C activator in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.cdh1_apc_c_activator`."
      },
      {
        "name": "emi1_cdh1_complex",
        "label": "Emi1-Cdh1 complex",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1_cdh1_complex",
        "description": "Tracks Emi1-Cdh1 complex in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1_cdh1_complex`."
      },
      {
        "name": "emi1_phosphorylated_cdh1_complex",
        "label": "Emi1-phosphorylated Cdh1 complex",
        "maps_to": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1_phosphorylated_cdh1_complex",
        "description": "Tracks Emi1-phosphorylated Cdh1 complex in the lab model via `cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.emi1_phosphorylated_cdh1_complex`."
      }
    ]
  },
  "title": "Barr2016 - All-or-nothing G1/S transition Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model",
      "alias": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model_state"
      ],
      "from": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model_summary"
      ],
      "from": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model_species_labels"
      ],
      "from": "cellcycle_sbml_barr2016_all_or_nothing_g1_s_transition_biomd0000000646_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Barr2016 - All-or-nothing G1/S transition. Barr2016 - All-or-nothing G1/Stransition This model is described in the article: A Dynamical Framework for the All-or-None G1/S Transition. Barr AR, Heldt FS, Zhang T, Bakal C, Nov\\u00e1k B.",
  "schema_version": "2.0"
}