BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Xu2005 - Blood Coagulation Model of Activated Factors of Extrinsic Pathway and TFPI Lab

About lab

Clean Biosimulant lab for systems signaling model: Xu2005 - Blood Coagulation Model of Activated Factors of Extrinsic Pathway and TFPI. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagexu2005-blood-coagulation-model-of-activated-factors-of-extrinsic
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicoagulationphysiologyvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_source_defined_x1_state",
        "label": "Initial source-defined X1 state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.initial_source_defined_x1_state",
        "description": "Initial level of source-defined X1 state. Maps to SBML symbol `x1`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_source_defined_x2_state",
        "label": "Initial source-defined X2 state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.initial_source_defined_x2_state",
        "description": "Initial level of source-defined X2 state. Maps to SBML symbol `x2`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_source_defined_x3_state",
        "label": "Initial source-defined X3 state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.initial_source_defined_x3_state",
        "description": "Initial level of source-defined X3 state. Maps to SBML symbol `x3`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "source_defined_x1_state",
        "label": "source-defined X1 state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.source_defined_x1_state",
        "description": "source-defined X1 state. Maps to SBML symbol `x1` and is emitted in native SBML units."
      },
      {
        "name": "source_defined_x2_state",
        "label": "source-defined X2 state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.source_defined_x2_state",
        "description": "source-defined X2 state. Maps to SBML symbol `x2` and is emitted in native SBML units."
      },
      {
        "name": "source_defined_x3_state",
        "label": "source-defined X3 state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.source_defined_x3_state",
        "description": "source-defined X3 state. Maps to SBML symbol `x3` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "coagulation",
    "physiology"
  ],
  "title": "Xu2005 - Blood Coagulation Model of Activated Factors of Extrinsic Pathway and TFPI Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model",
      "alias": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model_state"
      ],
      "from": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model_summary"
      ],
      "from": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model_species_labels"
      ],
      "from": "signaling_sbml_xu2005_blood_coagulation_model_of_activated_fact_model1806130002_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for systems signaling model: Xu2005 - Blood Coagulation Model of Activated Factors of Extrinsic Pathway and TFPI. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.