Friedland2009 Ara Rtc3 Counter Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_pgfp",
        "label": "Initial Pgfp",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.initial_pgfp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `pGFP`."
      },
      {
        "name": "initial_mt7cr",
        "label": "Initial Mt7cr",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.initial_mt7cr",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mT7cr`."
      },
      {
        "name": "initial_mgf_pcr",
        "label": "Initial Mgf Pcr",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.initial_mgf_pcr",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mGFPcr`."
      },
      {
        "name": "initial_model_state_pt7",
        "label": "Initial Model State PT7",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.initial_model_state_pt7",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `pT7`."
      },
      {
        "name": "initial_ta_rna",
        "label": "Initial Ta RNA",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.initial_ta_rna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `taRNA`."
      },
      {
        "name": "initial_mt3cr",
        "label": "Initial Mt3cr",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.initial_mt3cr",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mT3cr`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.species_labels"
      },
      {
        "name": "pgfp",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.pgfp"
      },
      {
        "name": "mt7cr",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.mt7cr"
      },
      {
        "name": "mgf_pcr",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.mgf_pcr"
      },
      {
        "name": "pt7",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.pt7"
      },
      {
        "name": "ta_rna",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.ta_rna"
      },
      {
        "name": "mt3cr",
        "maps_to": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.mt3cr"
      }
    ]
  },
  "tags": [
    "generegulation",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Friedland2009 Ara Rtc3 Counter Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model",
      "alias": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model_state"
      ],
      "from": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model_summary"
      ],
      "from": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model_species_labels"
      ],
      "from": "systemsbiology_sbml_friedland2009_ara_rtc3_counter_biomd0000000301_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This is the model of the RTC3 counter described in the article: Synthetic gene networks that count. Friedland AE, Lu TK, Wang X, Shi D, Church G, Collins JJ.",
  "schema_version": "2.0"
}