BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Wegner2012_TGFbetaSignalling_FeedbackLoops Lab

About lab

Clean Biosimulant lab for developmental and growth-control signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagewegner2012-tgfbetasignalling-feedbackloops-lab
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebitgf-betavisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_tgfbeta_level",
        "label": "Tgfbeta",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.initial_tgfbeta_level",
        "description": "Tgfbeta source parameter. Maps to SBML symbol `parameter_1` and preserves the bundled default."
      },
      {
        "name": "initial_tgf_ri",
        "label": "Initial TGF RI",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.initial_tgf_ri",
        "description": "Initial level of TGF RI. Maps to SBML symbol `_84`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_tgf_rii",
        "label": "Initial TGF RII",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.initial_tgf_rii",
        "description": "Initial level of TGF RII. Maps to SBML symbol `_75`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "rec_active",
        "label": "Rec active",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.rec_active",
        "description": "Rec active. Maps to SBML symbol `_96` and is emitted in native SBML units."
      },
      {
        "name": "smad2_c",
        "label": "Smad2 C",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.smad2_c",
        "description": "Smad2 C. Maps to SBML symbol `_99` and is emitted in native SBML units."
      },
      {
        "name": "smad2_sara",
        "label": "Smad2 SARA",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.smad2_sara",
        "description": "Smad2 SARA. Maps to SBML symbol `_105` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "tgf-beta"
  ],
  "title": "Wegner2012_TGFbetaSignalling_FeedbackLoops Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model",
      "alias": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model_state"
      ],
      "from": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model_summary"
      ],
      "from": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model_species_labels"
      ],
      "from": "signaling_sbml_wegner2012_tgfbetasignalling_feedbackloops_biomd0000000410_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for developmental and growth-control signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.