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Schneider2006 - Mechanism Frank Starling Law Simulation Study Novel Lab

About lab

Source-faithful physiology lab for Schneider, Shimayoshi, Amano, Matsuda, 2006. Public controls and outputs are mapped to real source symbols for calcium handling.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packageschneider2006-mechanism-frank-starling-law-simulation-study-nove
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_rua_madp",
        "label": "Initial Rua Madp",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.initial_rua_madp",
        "description": "Initial value for Rua Madp. Maps to source symbol `RUA_MADP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      },
      {
        "name": "initial_rua_madppi",
        "label": "Initial Rua Madppi",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.initial_rua_madppi",
        "description": "Initial value for Rua Madppi. Maps to source symbol `RUA_MADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.variable_labels"
      },
      {
        "name": "rua_madp",
        "label": "Rua Madp",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.rua_madp",
        "description": "Rua Madp. Maps to source symbol `RUA_MADP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "rua_madppi",
        "label": "Rua Madppi",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.rua_madppi",
        "description": "Rua Madppi. Maps to source symbol `RUA_MADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ruamadppi",
        "label": "Ruamadppi",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.ruamadppi",
        "description": "Ruamadppi. Maps to source symbol `RUAMADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "madppi",
        "label": "Madppi",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.madppi",
        "description": "Madppi. Maps to source symbol `MADPPi`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha",
        "label": "Alpha",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.alpha",
        "description": "Alpha. Maps to source symbol `alpha`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "q_adpr",
        "label": "Q Adpr",
        "maps_to": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.q_adpr",
        "description": "Q Adpr. Maps to source symbol `Q_ADPR`. Units: mM_per_msec. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Schneider2006 - Mechanism Frank Starling Law Simulation Study Novel Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model",
      "alias": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model",
      "parameters": {
        "model_path": "data/schneider_shimayoshi_amano_matsuda_2006.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_state"
      ],
      "from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_summary"
      ],
      "from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_trajectory"
      ],
      "from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model_variable_labels"
      ],
      "from": "physiology_cellml_schneider_shimayoshi_amano_matsuda_2006_schneidershimayoshiamanomatsuda2006_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Schneider, Shimayoshi, Amano, Matsuda, 2006. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}

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