About lab
Source-faithful physiology lab for Weak Acid Hydration. Public controls and outputs are mapped to real source symbols for respiratory physiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagephysiome-34d-weak-acid-hydration-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_q_h",
"label": "Initial Model State Q H (source q_H)",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.initial_model_state_q_h",
"description": "Initial value for Model State Q H (source q_H). Maps to source symbol `q_H`. Units: mol_per_m3. Naming evidence: source symbol is too ambiguous for a stronger public label.",
"accepted_units": [
"mol_per_m3"
]
},
{
"name": "initial_q_co2",
"label": "Initial Q Co2",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.initial_q_co2",
"description": "Initial value for Q Co2. Maps to source symbol `q_CO2`. Units: mol_per_m3. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mol_per_m3"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.variable_labels"
},
{
"name": "model_state_q_h",
"label": "Model State Q H (source q_H)",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.model_state_q_h",
"description": "Model State Q H (source q_H). Maps to source symbol `q_H`. Units: mol_per_m3. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "q_co2",
"label": "Q Co2",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.q_co2",
"description": "Q Co2. Maps to source symbol `q_CO2`. Units: mol_per_m3. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "q_hco3",
"label": "Q Hco3",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.q_hco3",
"description": "Q Hco3. Maps to source symbol `q_HCO3`. Units: mol_per_m3. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "model_variable_j_h",
"label": "Model Variable J H (source J_H)",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.model_variable_j_h",
"description": "Model Variable J H (source J_H). Maps to source symbol `J_H`. Units: mol_per_m3_s. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "model_variable_k_h",
"label": "Model Variable K H (source K_H)",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.model_variable_k_h",
"description": "Model Variable K H (source K_H). Maps to source symbol `K_H`. Units: m3_per_mol. Naming evidence: source symbol is too ambiguous for a stronger public label."
},
{
"name": "model_variable_k_re",
"label": "Model Variable K Re (source K_Re)",
"maps_to": "physiology_cellml_weak_acid_hydration_34d_model.model_variable_k_re",
"description": "Model Variable K Re (source K_Re). Maps to source symbol `K_Re`. Units: mol_per_m3_s. Naming evidence: source symbol is too ambiguous for a stronger public label."
}
]
},
"title": "Physiome 34d - Weak Acid Hydration Lab",
"models": [
{
"path": "owned/models/physiology_cellml_weak_acid_hydration_34d_model",
"alias": "physiology_cellml_weak_acid_hydration_34d_model",
"parameters": {
"model_path": "data/CO2_Hydration_module.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_weak_acid_hydration_34d_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_weak_acid_hydration_34d_model_state"
],
"from": "physiology_cellml_weak_acid_hydration_34d_model.state"
},
{
"to": [
"visualisation.physiology_cellml_weak_acid_hydration_34d_model_summary"
],
"from": "physiology_cellml_weak_acid_hydration_34d_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_weak_acid_hydration_34d_model_trajectory"
],
"from": "physiology_cellml_weak_acid_hydration_34d_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_weak_acid_hydration_34d_model_variable_labels"
],
"from": "physiology_cellml_weak_acid_hydration_34d_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for Weak Acid Hydration. Public controls and outputs are mapped to real source symbols for respiratory physiology.",
"schema_version": "2.0"
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