Troein2011 Clockcircuit Ostreococcustauri Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_cca1_mrna",
        "label": "Initial Cca1 MRNA",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.initial_cca1_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cca1_mrna`."
      },
      {
        "name": "initial_toc1_mrna",
        "label": "Initial Toc1 MRNA",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.initial_toc1_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `toc1_mrna`."
      },
      {
        "name": "initial_toc1luc_mrna",
        "label": "Initial Toc1luc MRNA",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.initial_toc1luc_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `toc1luc_mrna`."
      },
      {
        "name": "initial_luc_mrna",
        "label": "Initial Luc MRNA",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.initial_luc_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `luc_mrna`."
      },
      {
        "name": "initial_cca1luc_mrna",
        "label": "Initial Cca1luc MRNA",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.initial_cca1luc_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cca1luc_mrna`."
      },
      {
        "name": "initial_cca1_n",
        "label": "Initial Cca1 N",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.initial_cca1_n",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cca1_n`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.species_labels"
      },
      {
        "name": "cca1_mrna",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.cca1_mrna"
      },
      {
        "name": "toc1_mrna",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.toc1_mrna"
      },
      {
        "name": "toc1luc_mrna",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.toc1luc_mrna"
      },
      {
        "name": "luc_mrna",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.luc_mrna"
      },
      {
        "name": "cca1luc_mrna",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.cca1luc_mrna"
      },
      {
        "name": "cca1_n",
        "maps_to": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.cca1_n"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Troein2011 Clockcircuit Ostreococcustauri Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model",
      "alias": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model_state"
      ],
      "from": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model_summary"
      ],
      "from": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model_species_labels"
      ],
      "from": "systemsbiology_sbml_troein2011_clockcircuit_ostreococcustauri_biomd0000000350_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is from the article: Multiple light inputs to a simple clock circuit allow complex biological rhythms Troein C, Corellou F, Dixon LE, van Ooijen G, O'Neill JS, Bouget FY, Millar AJ. It can be used to explore systemsbiology troein2011 clockcircuit ostreococcustauri BioModels0000000350 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}