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Scaramellini1997 - Two-receptor:One-transducer (2R1T) model for analysis of interactions between agonists Lab

About lab

Clean Biosimulant lab for systems signaling model: Scaramellini1997 - Two-receptor:One-transducer (2R1T) model for analysis of interactions between agonists. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagescaramellini1997-two-receptor-one-transducer-2r1t-model-for-anal
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebigpcrvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_effect",
        "label": "Initial Effect",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.initial_effect",
        "description": "Initial level of Effect. Maps to SBML symbol `Effect`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_mediator_a1",
        "label": "Initial Mediator A1",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.initial_mediator_a1",
        "description": "Initial level of Mediator A1. Maps to SBML symbol `Mediator_A1`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_mediator_a2",
        "label": "Initial Mediator A2",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.initial_mediator_a2",
        "description": "Initial level of Mediator A2. Maps to SBML symbol `Mediator_A2`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "mediator_a1",
        "label": "Mediator A1",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.mediator_a1",
        "description": "Mediator A1. Maps to SBML symbol `Mediator_A1` and is emitted in native SBML units."
      },
      {
        "name": "mediator_a2",
        "label": "Mediator A2",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.mediator_a2",
        "description": "Mediator A2. Maps to SBML symbol `Mediator_A2` and is emitted in native SBML units."
      },
      {
        "name": "agonist_1",
        "label": "Agonist 1",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.agonist_1",
        "description": "Agonist 1. Maps to SBML symbol `Agonist_1` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "gpcr"
  ],
  "title": "Scaramellini1997 - Two-receptor:One-transducer (2R1T) model for analysis of interactions between agonists Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model",
      "alias": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model_state"
      ],
      "from": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model_summary"
      ],
      "from": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model_species_labels"
      ],
      "from": "signaling_sbml_scaramellini1997_two_receptor_one_transducer_2r1_biomd0000001008_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for systems signaling model: Scaramellini1997 - Two-receptor:One-transducer (2R1T) model for analysis of interactions between agonists. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

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