Olsen2003 - Mathematical Peroxidase Oxidase Reaction Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_oxygen",
        "label": "Initial Oxygen",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.initial_oxygen",
        "description": "Initial value for Oxygen. Maps to source symbol `O2`. Units: molar. Naming evidence: source metadata names `O2` as `oxygen`.",
        "accepted_units": [
          "molar"
        ]
      },
      {
        "name": "initial_oxygen_free_radical",
        "label": "Initial Oxygen Free Radical",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.initial_oxygen_free_radical",
        "description": "Initial value for Oxygen Free Radical. Maps to source symbol `O2_radical`. Units: molar. Naming evidence: source metadata names `O2_radical` as `oxygen free radical`.",
        "accepted_units": [
          "molar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.variable_labels"
      },
      {
        "name": "oxygen",
        "label": "Oxygen",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.oxygen",
        "description": "Oxygen. Maps to source symbol `O2`. Units: molar. Naming evidence: source metadata names `O2` as `oxygen`."
      },
      {
        "name": "aromatic_compound",
        "label": "Aromatic Compound",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.aromatic_compound",
        "description": "Aromatic Compound. Maps to source symbol `ArH`. Units: molar. Naming evidence: source metadata names `ArH` as `aromatic compound`."
      },
      {
        "name": "compound_i",
        "label": "Compound I",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.compound_i",
        "description": "Compound I. Maps to source symbol `coI`. Units: molar. Naming evidence: source metadata names `coI` as `compound I`."
      },
      {
        "name": "compound_ii",
        "label": "Compound Ii",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.compound_ii",
        "description": "Compound Ii. Maps to source symbol `coII`. Units: molar. Naming evidence: source metadata names `coII` as `compound II`."
      },
      {
        "name": "compound_iii",
        "label": "Compound Iii",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.compound_iii",
        "description": "Compound Iii. Maps to source symbol `coIII`. Units: molar. Naming evidence: source metadata names `coIII` as `compound III`."
      },
      {
        "name": "aromatic_compound_free_radical",
        "label": "Aromatic Compound Free Radical",
        "maps_to": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.aromatic_compound_free_radical",
        "description": "Aromatic Compound Free Radical. Maps to source symbol `Ar_radical`. Units: molar. Naming evidence: source metadata names `Ar_radical` as `aromatic compound free radical`."
      }
    ]
  },
  "title": "Olsen2003 - Mathematical Peroxidase Oxidase Reaction Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model",
      "alias": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model",
      "parameters": {
        "model_path": "data/olsen_hauser_kummer_2003.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model_state"
      ],
      "from": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model_summary"
      ],
      "from": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model_trajectory"
      ],
      "from": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model_variable_labels"
      ],
      "from": "physiology_cellml_olsen_hauser_kummer_2003_olsenhauserkummer2003_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Olsen, Hauser, Kummer, 2003. Public controls and outputs are mapped to real source symbols for respiratory physiology.",
  "schema_version": "2.0"
}