About lab
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. It can be used to explore systemsbiology goldbeter1995 circclock BioModels0000000016 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagegoldbeter1995-circclock-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_per_mrna",
"label": "Initial Per MRNA",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.initial_per_mrna",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `M`."
},
{
"name": "initial_total_per",
"label": "Initial Total Per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.initial_total_per",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pt`."
},
{
"name": "initial_unphosphorylated_per",
"label": "Initial Unphosphorylated Per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.initial_unphosphorylated_per",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `P0`."
},
{
"name": "initial_nuclear_per",
"label": "Initial Nuclear Per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.initial_nuclear_per",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pn`."
},
{
"name": "initial_monophosphorylated_per",
"label": "Initial Monophosphorylated Per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.initial_monophosphorylated_per",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `P1`."
},
{
"name": "initial_biphosphorylated_per",
"label": "Initial Biphosphorylated Per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.initial_biphosphorylated_per",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `P2`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.species_labels"
},
{
"name": "per_mrna",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.per_mrna"
},
{
"name": "total_per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.total_per"
},
{
"name": "unphosphorylated_per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.unphosphorylated_per"
},
{
"name": "nuclear_per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.nuclear_per"
},
{
"name": "monophosphorylated_per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.monophosphorylated_per"
},
{
"name": "biphosphorylated_per",
"maps_to": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.biphosphorylated_per"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Goldbeter1995 Circclock Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model",
"alias": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model_state"
],
"from": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model_summary"
],
"from": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model_species_labels"
],
"from": "systemsbiology_sbml_goldbeter1995_circclock_biomd0000000016_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. It can be used to explore systemsbiology goldbeter1995 circclock BioModels0000000016 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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