About lab
Source-faithful physiology lab for Farhy, Bowers, Veldhuis, 2007. Public controls and outputs are mapped to real source symbols for electrophysiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagefarhy2007-projected-mechanistic-bases-sex-differences-growth-hor
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_growth_hormone",
"label": "Initial Growth Hormone",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.initial_growth_hormone",
"description": "Initial value for Growth Hormone. Maps to source symbol `GH`. Units: ng_ml. Naming evidence: source metadata names `GH` as `growth hormone`.",
"accepted_units": [
"ng_ml"
]
},
{
"name": "initial_growth_hormone_releasing_hormone",
"label": "Initial Growth Hormone Releasing Hormone",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.initial_growth_hormone_releasing_hormone",
"description": "Initial value for Growth Hormone Releasing Hormone. Maps to source symbol `GHRH`. Units: pg_ml. Naming evidence: source metadata names `GHRH` as `growth hormone releasing hormone`.",
"accepted_units": [
"pg_ml"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.variable_labels"
},
{
"name": "growth_hormone",
"label": "Growth Hormone",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.growth_hormone",
"description": "Growth Hormone. Maps to source symbol `GH`. Units: ng_ml. Naming evidence: source metadata names `GH` as `growth hormone`."
},
{
"name": "growth_hormone_releasing_hormone",
"label": "Growth Hormone Releasing Hormone",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.growth_hormone_releasing_hormone",
"description": "Growth Hormone Releasing Hormone. Maps to source symbol `GHRH`. Units: pg_ml. Naming evidence: source metadata names `GHRH` as `growth hormone releasing hormone`."
},
{
"name": "simulation_of_ghrh_infusion",
"label": "Simulation Of Ghrh Infusion",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.simulation_of_ghrh_infusion",
"description": "Simulation Of Ghrh Infusion. Maps to source symbol `ghr_GHRH`. Units: pg_ml. Naming evidence: source metadata names `ghr_GHRH` as `simulation of GHRH infusion`."
},
{
"name": "somatostatin_in_the_arcuate_nucleus",
"label": "Somatostatin In The Arcuate Nucleus",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.somatostatin_in_the_arcuate_nucleus",
"description": "Somatostatin In The Arcuate Nucleus. Maps to source symbol `SRIF_ArC`. Units: pg_ml. Naming evidence: source metadata names `SRIF_ArC` as `somatostatin in the arcuate nucleus`."
},
{
"name": "somatostatin_in_the_periventricular_nucleus",
"label": "Somatostatin In The Periventricular Nucleus",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.somatostatin_in_the_periventricular_nucleus",
"description": "Somatostatin In The Periventricular Nucleus. Maps to source symbol `SRIF_PeV`. Units: pg_ml. Naming evidence: source metadata names `SRIF_PeV` as `somatostatin in the periventricular nucleus`."
},
{
"name": "dghr_ghrh_dt",
"label": "Dghr Ghrh Dt",
"maps_to": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.dghr_ghrh_dt",
"description": "Dghr Ghrh Dt. Maps to source symbol `dghr_GHRH_dt`. Units: pg_ml_hr. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Farhy2007 - Projected Mechanistic Bases Sex Differences Growth Hormone Lab",
"models": [
{
"path": "owned/models/physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model",
"alias": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model",
"parameters": {
"model_path": "data/farhy_bowers_veldhuis_2007_a.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model_state"
],
"from": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.state"
},
{
"to": [
"visualisation.physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model_summary"
],
"from": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model_trajectory"
],
"from": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model_variable_labels"
],
"from": "physiology_cellml_farhy_bowers_veldhuis_2007_farhybowersveldhuis2007_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for Farhy, Bowers, Veldhuis, 2007. Public controls and outputs are mapped to real source symbols for electrophysiology.",
"schema_version": "2.0"
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