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Physiome 83a - Bg K ATP Lab

About lab

Source-faithful physiology lab for BG_K_ATP. Public controls and outputs are mapped to real source symbols for source-model physiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagephysiome-83a-bg-k-atp-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_q_k_i",
        "label": "Initial Q K I",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.initial_q_k_i",
        "description": "Initial value for Q K I. Maps to source symbol `q_K_i`. Units: fmol. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "fmol"
        ]
      },
      {
        "name": "initial_q_k_o",
        "label": "Initial Q K O",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.initial_q_k_o",
        "description": "Initial value for Q K O. Maps to source symbol `q_K_o`. Units: fmol. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "fmol"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.variable_labels"
      },
      {
        "name": "membrane_capacitance",
        "label": "Membrane Capacitance",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.membrane_capacitance",
        "description": "Membrane Capacitance. Maps to source symbol `C_m`. Units: fF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "af_k_atp",
        "label": "Af K ATP",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.af_k_atp",
        "description": "Af K ATP. Maps to source symbol `Af_K_ATP`. Units: J_per_mol. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "am_k_atp",
        "label": "Am K ATP",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.am_k_atp",
        "description": "Am K ATP. Maps to source symbol `Am_K_ATP`. Units: J_per_mol. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ar_k_atp",
        "label": "Ar K ATP",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.ar_k_atp",
        "description": "Ar K ATP. Maps to source symbol `Ar_K_ATP`. Units: J_per_mol. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "i_mem_k_atp",
        "label": "I Mem K ATP",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.i_mem_k_atp",
        "description": "I Mem K ATP. Maps to source symbol `I_mem_K_ATP`. Units: fA. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "model_parameter_z_k",
        "label": "Model Parameter Z K (source zK)",
        "maps_to": "physiology_cellml_bg_k_atp_83a_model.model_parameter_z_k",
        "description": "Model Parameter Z K (source zK). Maps to source symbol `zK`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label."
      }
    ]
  },
  "title": "Physiome 83a - Bg K ATP Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_bg_k_atp_83a_model",
      "alias": "physiology_cellml_bg_k_atp_83a_model",
      "parameters": {
        "model_path": "data/BG_K_ATP.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_bg_k_atp_83a_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_bg_k_atp_83a_model_state"
      ],
      "from": "physiology_cellml_bg_k_atp_83a_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bg_k_atp_83a_model_summary"
      ],
      "from": "physiology_cellml_bg_k_atp_83a_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bg_k_atp_83a_model_trajectory"
      ],
      "from": "physiology_cellml_bg_k_atp_83a_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bg_k_atp_83a_model_variable_labels"
      ],
      "from": "physiology_cellml_bg_k_atp_83a_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for BG_K_ATP. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}

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