Colegrove2000 - Cell Schematic Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_ca_m",
        "label": "Initial Ca M",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.initial_ca_m",
        "description": "Initial value for Ca M. Maps to source symbol `Ca_m`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "nanomolar"
        ]
      },
      {
        "name": "initial_intracellular_calcium",
        "label": "Initial Intracellular Calcium",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.initial_intracellular_calcium",
        "description": "Initial value for Intracellular Calcium. Maps to source symbol `Ca_i`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "nanomolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.variable_labels"
      },
      {
        "name": "ec50_extru",
        "label": "Ec50 Extru",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.ec50_extru",
        "description": "Ec50 Extru. Maps to source symbol `EC50_extru`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "extracellular_calcium",
        "label": "Extracellular Calcium",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.extracellular_calcium",
        "description": "Extracellular Calcium. Maps to source symbol `Ca_o`. Units: nanomolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "rate_constant_j_pm",
        "label": "Rate Constant J Pm (source J_pm)",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.rate_constant_j_pm",
        "description": "Rate Constant J Pm (source J_pm). Maps to source symbol `J_pm`. Units: nanomolar_per_second. Naming evidence: units identify a rate constant but not a fuller biological role."
      },
      {
        "name": "vmax_extru",
        "label": "Vmax Extru",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.vmax_extru",
        "description": "Vmax Extru. Maps to source symbol `Vmax_extru`. Units: nanomolar_per_second. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "j_extru",
        "label": "J Extru",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.j_extru",
        "description": "J Extru. Maps to source symbol `J_extru`. Units: nanomolar_per_second. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "j_leak",
        "label": "J Leak",
        "maps_to": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.j_leak",
        "description": "J Leak. Maps to source symbol `J_leak`. Units: nanomolar_per_second. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Colegrove2000 - Cell Schematic Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model",
      "parameters": {
        "model_path": "data/colegrove_albrecht_friel_2000.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model_state"
      ],
      "from": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model_summary"
      ],
      "from": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model_trajectory"
      ],
      "from": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model_variable_labels"
      ],
      "from": "physiology_cellml_colegrove_albrecht_friel_2000_colegrovealbrechtfriel2000_model.variable_labels"
    }
  ],
  "package": "colegrove2000-cell-schematic",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Colegrove, Albrecht, Friel, 2000. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}