Amstein2017 - TNFR1-mediated Nf-κB signaling, Petri Net Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_tnf",
        "label": "Initial TNF",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.initial_tnf",
        "description": "Initial level of TNF. Maps to SBML symbol `P5`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_tnf_receptor_1",
        "label": "Initial TNF receptor 1",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.initial_tnf_receptor_1",
        "description": "Initial level of TNF receptor 1. Maps to SBML symbol `P4`; exposed as a traceable initial-condition perturbation."
      },
      {
        "name": "initial_tnf_receptor_1_tnf",
        "label": "Initial TNF receptor 1 TNF",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.initial_tnf_receptor_1_tnf",
        "description": "Initial level of TNF receptor 1 TNF. Maps to SBML symbol `P6`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "nf_b_n_gen_a20",
        "label": "NF B N Gen A20",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.nf_b_n_gen_a20",
        "description": "NF B N Gen A20. Maps to SBML symbol `P0` and is emitted in native SBML units."
      },
      {
        "name": "nf_b_n_gen_i_b",
        "label": "NF B N Gen I B",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.nf_b_n_gen_i_b",
        "description": "NF B N Gen I B. Maps to SBML symbol `P2` and is emitted in native SBML units."
      },
      {
        "name": "tnf_receptor_1",
        "label": "TNF receptor 1",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.tnf_receptor_1",
        "description": "TNF receptor 1. Maps to SBML symbol `P4` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "nfkb",
    "tnf-signaling"
  ],
  "title": "Amstein2017 - TNFR1-mediated Nf-κB signaling, Petri Net Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model",
      "alias": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model_state"
      ],
      "from": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model_summary"
      ],
      "from": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model_species_labels"
      ],
      "from": "signaling_sbml_amstein2017_tnfr1_mediated_nf_b_signaling_petri_model2312010001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for NF-kB pathway signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}