About lab
This a model from the article: Bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeabilitytransition pores. Bagci EZ, Vodovotz Y, Billiar TR, Ermentrout GB, Bahar I.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagebagci2006-apoptoticstimuli-lab
Created2026-05-17
Updated2026-05-17
metabolismsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
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{
"name": "initial_cytc_apaf_1",
"label": "Initial Cytc Apaf 1",
"maps_to": "systemsbiology_sbml_bagci2006_apoptoticstimuli_model1006230056_model.initial_cytc_apaf_1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CytcApaf_1`."
},
{
"name": "initial_casp9_pro3",
"label": "Initial Casp9 Pro3",
"maps_to": "systemsbiology_sbml_bagci2006_apoptoticstimuli_model1006230056_model.initial_casp9_pro3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Casp9Pro3`."
},
{
"name": "initial_casp9_iap",
"label": "Initial Casp9 Iap",
"maps_to": "systemsbiology_sbml_bagci2006_apoptoticstimuli_model1006230056_model.initial_casp9_iap",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Casp9IAP`."
},
{
"name": "initial_casp9",
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"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Casp9`."
},
{
"name": "initial_casp8_bid",
"label": "Initial Casp8 Bid",
"maps_to": "systemsbiology_sbml_bagci2006_apoptoticstimuli_model1006230056_model.initial_casp8_bid",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Casp8Bid`."
},
{
"name": "initial_casp8",
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}
],
"outputs": [
{
"name": "state",
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},
{
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{
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{
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{
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},
{
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},
{
"name": "casp8_bid",
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},
{
"name": "casp8",
"maps_to": "systemsbiology_sbml_bagci2006_apoptoticstimuli_model1006230056_model.casp8"
}
]
},
"tags": [
"metabolism",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Bagci2006 Apoptoticstimuli Lab",
"models": [
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],
"runtime": {
"duration": 1,
"initial_inputs": {},
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},
"description": "This a model from the article: Bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeabilitytransition pores. Bagci EZ, Vodovotz Y, Billiar TR, Ermentrout GB, Bahar I.",
"schema_version": "2.0"
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