Scharf2023 - Holistic View on the Structure of Immune Response: Petri Net Model Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_t_bl",
        "label": "Initial T Bl",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.initial_t_bl",
        "description": "Initial T Bl. Sets the initial value of bundled SBML species `P3`."
      },
      {
        "name": "initial_unresolved_signaling_observable_1",
        "label": "Initial Unresolved Signaling Observable 1",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.initial_unresolved_signaling_observable_1",
        "description": "Initial Unresolved Signaling Observable 1. Sets the initial value of bundled SBML species `P4`."
      },
      {
        "name": "initial_unresolved_signaling_observable_2",
        "label": "Initial Unresolved Signaling Observable 2",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.initial_unresolved_signaling_observable_2",
        "description": "Initial Unresolved Signaling Observable 2. Sets the initial value of bundled SBML species `P7`."
      },
      {
        "name": "initial_t_tz",
        "label": "Initial T Tz",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.initial_t_tz",
        "description": "Initial T Tz. Sets the initial value of bundled SBML species `P8`."
      },
      {
        "name": "initial_unresolved_immune_observable_1",
        "label": "Initial Unresolved Immune Observable 1",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.initial_unresolved_immune_observable_1",
        "description": "Initial Unresolved Immune Observable 1. Sets the initial value of bundled SBML species `P137`."
      }
    ],
    "outputs": [
      {
        "name": "t_bl",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.t_bl"
      },
      {
        "name": "unresolved_signaling_observable_1",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.unresolved_signaling_observable_1"
      },
      {
        "name": "unresolved_signaling_observable_2",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.unresolved_signaling_observable_2"
      },
      {
        "name": "t_tz",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.t_tz"
      },
      {
        "name": "unresolved_immune_observable_1",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.unresolved_immune_observable_1"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.species_labels"
      }
    ]
  },
  "title": "Scharf2023 - Holistic View on the Structure of Immune Response: Petri Net Model Lab",
  "models": [
    {
      "path": "owned/models/immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model",
      "alias": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model",
      "provenance": {
        "owned_path": "owned/models/immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model_state"
      ],
      "from": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model_summary"
      ],
      "from": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model_species_labels"
      ],
      "from": "immunology_sbml_scharf2023_holistic_view_on_the_structure_of_imm_model2304260001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Immunology Scharf2023Holistic View On The Structure Of Imm Model2304260001Model models core biological dynamics as a OTHER simulation curated from biomodels_ebi (biomodels_ebi:MODEL2304260001), focused on immun. When you run it, you can track state over time and compare response patterns across parameter settings.",
  "schema_version": "2.0"
}