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Fitzhugh1961 - Impulses Physiological States Theoretical Nerve Membrane Lab

About lab

Source-faithful physiology lab for Fitzhugh, 1961. Public controls and outputs are mapped to real source symbols for electrophysiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagefitzhugh1961-impulses-physiological-states-theoretical-nerve-mem
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_normalised_membrane_voltage",
        "label": "Initial Normalised Membrane Voltage (source v)",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.initial_normalised_membrane_voltage",
        "description": "Initial value for Normalised Membrane Voltage (source v). Maps to source symbol `v`. Units: dimensionless. Naming evidence: FitzHugh/Nagumo nerve-membrane context identifies a dimensionless voltage-like state.",
        "accepted_units": [
          "dimensionless"
        ]
      },
      {
        "name": "initial_main_w",
        "label": "Initial Main W",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.initial_main_w",
        "description": "Initial value for Main W. Maps to source symbol `w`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.variable_labels"
      },
      {
        "name": "normalised_membrane_voltage",
        "label": "Normalised Membrane Voltage (source v)",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.normalised_membrane_voltage",
        "description": "Normalised Membrane Voltage (source v). Maps to source symbol `v`. Units: dimensionless. Naming evidence: FitzHugh/Nagumo nerve-membrane context identifies a dimensionless voltage-like state."
      },
      {
        "name": "main_w",
        "label": "Main W",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.main_w",
        "description": "Main W. Maps to source symbol `w`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha",
        "label": "Alpha",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.alpha",
        "description": "Alpha. Maps to source symbol `alpha`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "epsilon",
        "label": "Epsilon",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.epsilon",
        "description": "Epsilon. Maps to source symbol `epsilon`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "gamma",
        "label": "Gamma",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.gamma",
        "description": "Gamma. Maps to source symbol `gamma`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "main_i",
        "label": "Main I",
        "maps_to": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.main_i",
        "description": "Main I. Maps to source symbol `I`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Fitzhugh1961 - Impulses Physiological States Theoretical Nerve Membrane Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_fitzhugh_1961_fitzhugh1961_model",
      "alias": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model",
      "parameters": {
        "model_path": "data/fitzhugh_1961.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_fitzhugh_1961_fitzhugh1961_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_fitzhugh_1961_fitzhugh1961_model_state"
      ],
      "from": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_fitzhugh_1961_fitzhugh1961_model_summary"
      ],
      "from": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_fitzhugh_1961_fitzhugh1961_model_trajectory"
      ],
      "from": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_fitzhugh_1961_fitzhugh1961_model_variable_labels"
      ],
      "from": "physiology_cellml_fitzhugh_1961_fitzhugh1961_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Fitzhugh, 1961. Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}

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