About lab
Clean Biosimulant lab for immune signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagecaruso2020-alternative-complement-pathway-model-lab
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicomplementvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_k_el_c5a_level",
"label": "K El C5a",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.initial_k_el_c5a_level",
"description": "K El C5a source parameter. Maps to SBML symbol `mw0eca22f3_9f69_4c28_8450_109dea301a7e` and preserves the bundled default."
},
{
"name": "initial_k_el_drug_level",
"label": "K El Drug",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.initial_k_el_drug_level",
"description": "K El Drug source parameter. Maps to SBML symbol `mw2904b9f4_09fe_48f9_a742_05908528bc90` and preserves the bundled default."
},
{
"name": "initial_k_el_i_complement_c3b_level",
"label": "K El I complement C3b",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.initial_k_el_i_complement_c3b_level",
"description": "K El I complement C3b source parameter. Maps to SBML symbol `mwf3fb9035_f67a_4a45_a797_5c11abaa0feb` and preserves the bundled default."
}
],
"outputs": [
{
"name": "cn_ugm_l",
"label": "Cn Ugm L",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.cn_ugm_l",
"description": "Cn Ugm L. Maps to SBML symbol `mw43392936_e299_4891_89da_819acae8a437` and is emitted in native SBML units."
},
{
"name": "erythrocytes_u_m",
"label": "Erythrocytes U M",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.erythrocytes_u_m",
"description": "Erythrocytes U M. Maps to SBML symbol `mw69ef1201_c624_479d_9761_6839f82ca5fd` and is emitted in native SBML units."
},
{
"name": "erythrocytes_n_l",
"label": "Erythrocytes N L",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.erythrocytes_n_l",
"description": "Erythrocytes N L. Maps to SBML symbol `mwb12eecaa_a5f3_4796_a6b0_621255476677` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"complement"
],
"title": "Caruso2020 - Alternative Complement Pathway model Lab",
"models": [
{
"path": "owned/models/signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model",
"alias": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model",
"provenance": {
"owned_path": "owned/models/signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model_state"
],
"from": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.state"
},
{
"to": [
"visualisation.signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model_summary"
],
"from": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model_species_labels"
],
"from": "signaling_sbml_caruso2020_alternative_complement_pathway_model_model2206230002_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Clean Biosimulant lab for immune signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
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