Mittler1998 - Mathematical Influence Delayed Viral Production Viral Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_infectious_virus",
        "label": "Initial Infectious Virus",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.initial_infectious_virus",
        "description": "Initial value for Infectious Virus. Maps to source symbol `VI`. Units: per_ml. Naming evidence: source metadata names `VI` as `infectious virus`.",
        "accepted_units": [
          "per_ml"
        ]
      },
      {
        "name": "initial_non_infectious_virus",
        "label": "Initial Non Infectious Virus",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.initial_non_infectious_virus",
        "description": "Initial value for Non Infectious Virus. Maps to source symbol `VNI`. Units: per_ml. Naming evidence: source metadata names `VNI` as `non-infectious virus`.",
        "accepted_units": [
          "per_ml"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.variable_labels"
      },
      {
        "name": "infectious_virus",
        "label": "Infectious Virus",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.infectious_virus",
        "description": "Infectious Virus. Maps to source symbol `VI`. Units: per_ml. Naming evidence: source metadata names `VI` as `infectious virus`."
      },
      {
        "name": "viral_quantity_v",
        "label": "Viral Quantity V (source V)",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.viral_quantity_v",
        "description": "Viral Quantity V (source V). Maps to source symbol `V`. Units: per_ml. Naming evidence: viral/infection context supports a conservative viral quantity label."
      },
      {
        "name": "density_state_e1",
        "label": "Density State E1 (source E1)",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.density_state_e1",
        "description": "Density State E1 (source E1). Maps to source symbol `E1`. Units: per_ml. Naming evidence: density-like units identify a concentration or density state."
      },
      {
        "name": "density_state_e2",
        "label": "Density State E2 (source E2)",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.density_state_e2",
        "description": "Density State E2 (source E2). Maps to source symbol `E2`. Units: per_ml. Naming evidence: density-like units identify a concentration or density state."
      },
      {
        "name": "density_state_e3",
        "label": "Density State E3 (source E3)",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.density_state_e3",
        "description": "Density State E3 (source E3). Maps to source symbol `E3`. Units: per_ml. Naming evidence: density-like units identify a concentration or density state."
      },
      {
        "name": "density_state_e4",
        "label": "Density State E4 (source E4)",
        "maps_to": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.density_state_e4",
        "description": "Density State E4 (source E4). Maps to source symbol `E4`. Units: per_ml. Naming evidence: density-like units identify a concentration or density state."
      }
    ]
  },
  "title": "Mittler1998 - Mathematical Influence Delayed Viral Production Viral Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model",
      "alias": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model",
      "parameters": {
        "model_path": "data/mittler_sulzer_neumann_perelson_1998.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model_state"
      ],
      "from": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model_summary"
      ],
      "from": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model_trajectory"
      ],
      "from": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model_variable_labels"
      ],
      "from": "physiology_cellml_mittler_sulzer_neumann_perelson_1998_mittlersulzerneumannperelson1998_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Mittler, Sulzer, Neumann, Perelson, 1998. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}