Revilla2003 - Garcia Ramos Dynamic Hiv 1 Therapy Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_pathogen_virus",
        "label": "Initial Pathogen Virus",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.initial_pathogen_virus",
        "description": "Initial value for Pathogen Virus. Maps to source symbol `v`. Units: vir. Naming evidence: source metadata names `v` as `pathogen virus`.",
        "accepted_units": [
          "vir"
        ]
      },
      {
        "name": "initial_recombinant_virus",
        "label": "Initial Recombinant Virus",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.initial_recombinant_virus",
        "description": "Initial value for Recombinant Virus. Maps to source symbol `w`. Units: vir. Naming evidence: source metadata names `w` as `recombinant virus`.",
        "accepted_units": [
          "vir"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.variable_labels"
      },
      {
        "name": "pathogen_virus",
        "label": "Pathogen Virus",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.pathogen_virus",
        "description": "Pathogen Virus. Maps to source symbol `v`. Units: vir. Naming evidence: source metadata names `v` as `pathogen virus`."
      },
      {
        "name": "recombinant_virus",
        "label": "Recombinant Virus",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.recombinant_virus",
        "description": "Recombinant Virus. Maps to source symbol `w`. Units: vir. Naming evidence: source metadata names `w` as `recombinant virus`."
      },
      {
        "name": "double_infected_cell",
        "label": "Double Infected Cell",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.double_infected_cell",
        "description": "Double Infected Cell. Maps to source symbol `z`. Units: cell. Naming evidence: source metadata names `z` as `double-infected cell`."
      },
      {
        "name": "normal_cell",
        "label": "Normal Cell",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.normal_cell",
        "description": "Normal Cell. Maps to source symbol `x`. Units: cell. Naming evidence: source metadata names `x` as `normal cell`."
      },
      {
        "name": "single_infected_cell",
        "label": "Single Infected Cell",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.single_infected_cell",
        "description": "Single Infected Cell. Maps to source symbol `y`. Units: cell. Naming evidence: source metadata names `y` as `single-infected cell`."
      },
      {
        "name": "alpha",
        "label": "Alpha",
        "maps_to": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.alpha",
        "description": "Alpha. Maps to source symbol `alpha`. Units: mm3_per_vir_day. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Revilla2003 - Garcia Ramos Dynamic Hiv 1 Therapy Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model",
      "alias": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model",
      "parameters": {
        "model_path": "data/revilla_garcia-ramos_2003.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model_state"
      ],
      "from": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model_summary"
      ],
      "from": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model_trajectory"
      ],
      "from": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model_variable_labels"
      ],
      "from": "physiology_cellml_revilla_garcia_ramos_2003_revillagarciaramos2003_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Revilla, Garcia-Ramos, 2003. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}