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Dan2006 Glycolysis Reduction Lab

About lab

This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2011 The BioModels.net Team.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagedan2006-glycolysis-reduction-lab
Created2026-05-17
Updated2026-05-17
metabolismsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_aca",
        "label": "Initial Model State Aca",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.initial_model_state_aca",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ACA`."
      },
      {
        "name": "initial_acax",
        "label": "Initial Acax",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.initial_acax",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ACAX`."
      },
      {
        "name": "initial_triose_p",
        "label": "Initial Triose P",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.initial_triose_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `trioseP`."
      },
      {
        "name": "initial_source",
        "label": "Initial Source",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.initial_source",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `source`."
      },
      {
        "name": "initial_sink",
        "label": "Initial Sink",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.initial_sink",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `sink`."
      },
      {
        "name": "initial_glc_x",
        "label": "Initial Glc X",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.initial_glc_x",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GlcX`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.species_labels"
      },
      {
        "name": "aca",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.aca"
      },
      {
        "name": "acax",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.acax"
      },
      {
        "name": "triose_p",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.triose_p"
      },
      {
        "name": "source",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.source"
      },
      {
        "name": "sink",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.sink"
      },
      {
        "name": "glc_x",
        "maps_to": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.glc_x"
      }
    ]
  },
  "tags": [
    "metabolism",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Dan2006 Glycolysis Reduction Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model",
      "alias": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model_state"
      ],
      "from": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model_summary"
      ],
      "from": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model_species_labels"
      ],
      "from": "systemsbiology_sbml_dan_2006_glycolysis_reduction_model5952308332_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model originates from BioModels Database: A Database of Annotated Published Models. It is copyright (c) 2005-2011 The BioModels.net Team.",
  "schema_version": "2.0"
}

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