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Aguilera2017 Irf7 Circuit Lab

About lab

murine IRF7/IFN gene circuit. Model destription:The model describes the dynamics of murine IRF7 gene expression upon IFN stimulation. The present model comprises known key components and feedback mechanisms.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packageaguilera2017-irf7-circuit-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "irf7",
        "maps_to": "aguilera2017_irf7_circuit.irf7"
      },
      {
        "name": "phosphorylated_irf7",
        "maps_to": "aguilera2017_irf7_circuit.phosphorylated_irf7"
      },
      {
        "name": "irf7_dimer",
        "maps_to": "aguilera2017_irf7_circuit.irf7_dimer"
      },
      {
        "name": "interferon",
        "maps_to": "aguilera2017_irf7_circuit.interferon"
      },
      {
        "name": "state",
        "maps_to": "aguilera2017_irf7_circuit.state"
      },
      {
        "name": "summary",
        "maps_to": "aguilera2017_irf7_circuit.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "aguilera2017_irf7_circuit.species_labels"
      }
    ]
  },
  "title": "Aguilera2017 Irf7 Circuit Lab",
  "models": [
    {
      "path": "owned/models/aguilera2017_irf7_circuit",
      "alias": "aguilera2017_irf7_circuit",
      "parameters": {
        "model_path": "data/MODEL1608100001.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/aguilera2017_irf7_circuit"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_irf7"
      ],
      "from": "aguilera2017_irf7_circuit.irf7"
    },
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_phosphorylated_irf7"
      ],
      "from": "aguilera2017_irf7_circuit.phosphorylated_irf7"
    },
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_irf7_dimer"
      ],
      "from": "aguilera2017_irf7_circuit.irf7_dimer"
    },
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_interferon"
      ],
      "from": "aguilera2017_irf7_circuit.interferon"
    },
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_state"
      ],
      "from": "aguilera2017_irf7_circuit.state"
    },
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_summary"
      ],
      "from": "aguilera2017_irf7_circuit.summary"
    },
    {
      "to": [
        "visualisation.aguilera2017_irf7_circuit_species_labels"
      ],
      "from": "aguilera2017_irf7_circuit.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "murine IRF7/IFN gene circuit. Model destription:The model describes the dynamics of murine IRF7 gene expression upon IFN stimulation. The present model comprises known key components and feedback mechanisms.",
  "schema_version": "2.0"
}

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