BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Keating2019 Minimal Model Demonstrating Sbml Level 3 Packages Lab

About lab

Minimal model demonstrating SBML Level 3 packages. It can be used to explore systemsbiology keating2019 minimal demonstrating lev model1904090001 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagekeating2019-minimal-model-demonstrating-sbml-level-3-packages-la
Created2026-05-17
Updated2026-05-17
cellcyclesystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_glucose",
        "label": "Initial Glucose",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.initial_glucose",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `glc`."
      },
      {
        "name": "initial_glucose_6_phosphate",
        "label": "Initial Glucose 6 Phosphate",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.initial_glucose_6_phosphate",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `g6p`."
      },
      {
        "name": "initial_model_state_atp",
        "label": "Initial Model State ATP",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.initial_model_state_atp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `atp`."
      },
      {
        "name": "initial_model_state_adp",
        "label": "Initial Model State ADP",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.initial_model_state_adp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `adp`."
      },
      {
        "name": "initial_model_state_p",
        "label": "Initial Model State P",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.initial_model_state_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `phos`."
      },
      {
        "name": "initial_model_state_h",
        "label": "Initial Model State H",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.initial_model_state_h",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `hydron`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.species_labels"
      },
      {
        "name": "glucose",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.glucose"
      },
      {
        "name": "glucose_6_phosphate",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.glucose_6_phosphate"
      },
      {
        "name": "atp",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.atp"
      },
      {
        "name": "adp",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.adp"
      },
      {
        "name": "model_state_p",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.model_state_p"
      },
      {
        "name": "model_state_h",
        "maps_to": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.model_state_h"
      }
    ]
  },
  "tags": [
    "cellcycle",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Keating2019 Minimal Model Demonstrating Sbml Level 3 Packages Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model",
      "alias": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model_state"
      ],
      "from": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model_summary"
      ],
      "from": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model_species_labels"
      ],
      "from": "systemsbiology_sbml_keating2019_minimal_model_demonstrating_sbml_lev_model1904090001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Minimal model demonstrating SBML Level 3 packages. It can be used to explore systemsbiology keating2019 minimal demonstrating lev model1904090001 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.