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Thomsen1989 Adenylatecyclase Lab

About lab

This model reproduces figure 5 and figure 4(B)of the paper, with Kinh represented by [G-GTP]. It can be used to explore systemsbiology thomsen1989 adenylatecyclase BioModels0000000080 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagethomsen1989-adenylatecyclase-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_g_gdp",
        "label": "Initial G Gdp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.initial_g_gdp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `G_GDP`."
      },
      {
        "name": "initial_g_gtp",
        "label": "Initial G Gtp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.initial_g_gtp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `G_GTP`."
      },
      {
        "name": "initial_drg_gtp",
        "label": "Initial Drg Gtp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.initial_drg_gtp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `DRG_GTP`."
      },
      {
        "name": "initial_drg_gdp",
        "label": "Initial Drg Gdp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.initial_drg_gdp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `DRG_GDP`."
      },
      {
        "name": "initial_model_state_gtp",
        "label": "Initial Model State Gtp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.initial_model_state_gtp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GTP`."
      },
      {
        "name": "initial_model_state_gdp",
        "label": "Initial Model State Gdp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.initial_model_state_gdp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GDP`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.species_labels"
      },
      {
        "name": "g_gdp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.g_gdp"
      },
      {
        "name": "g_gtp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.g_gtp"
      },
      {
        "name": "drg_gtp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.drg_gtp"
      },
      {
        "name": "drg_gdp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.drg_gdp"
      },
      {
        "name": "gtp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.gtp"
      },
      {
        "name": "gdp",
        "maps_to": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.gdp"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Thomsen1989 Adenylatecyclase Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model",
      "alias": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model_state"
      ],
      "from": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model_summary"
      ],
      "from": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model_species_labels"
      ],
      "from": "systemsbiology_sbml_thomsen1989_adenylatecyclase_biomd0000000080_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model reproduces figure 5 and figure 4(B)of the paper, with Kinh represented by [G-GTP]. It can be used to explore systemsbiology thomsen1989 adenylatecyclase BioModels0000000080 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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