About lab
Source-faithful physiology lab for Cooling, Hunter, Crampin, 2007. Public controls and outputs are mapped to real source symbols for electrophysiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagecooling2007-modeling-hypertrophic-ip3-transients-cardiac-myocyte
Created2026-05-23
Updated2026-06-13
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_calcium",
"label": "Initial Calcium",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.initial_calcium",
"description": "Initial value for Calcium. Maps to source symbol `Ca`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"uM"
]
},
{
"name": "initial_inositol_trisphosphate",
"label": "Initial Inositol Trisphosphate",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.initial_inositol_trisphosphate",
"description": "Initial value for Inositol Trisphosphate. Maps to source symbol `IP3`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"uM"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.variable_labels"
},
{
"name": "calcium",
"label": "Calcium",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.calcium",
"description": "Calcium. Maps to source symbol `Ca`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "inositol_trisphosphate",
"label": "Inositol Trisphosphate",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.inositol_trisphosphate",
"description": "Inositol Trisphosphate. Maps to source symbol `IP3`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "all_gd",
"label": "All Gd",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.all_gd",
"description": "All Gd. Maps to source symbol `Gd`. Units: per_um2. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "all_gt",
"label": "All Gt",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.all_gt",
"description": "All Gt. Maps to source symbol `Gt`. Units: per_um2. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "all_p",
"label": "All P",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.all_p",
"description": "All P. Maps to source symbol `P`. Units: per_um2. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "all_pc",
"label": "All Pc",
"maps_to": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.all_pc",
"description": "All Pc. Maps to source symbol `Pc`. Units: per_um2. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Cooling2007 - Modeling Hypertrophic IP3 Transients Cardiac Myocyte Lab",
"models": [
{
"path": "models/core",
"alias": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model",
"parameters": {
"model_path": "data/cooling_hunter_crampin_2007.cellml",
"integration_step": 0.01
}
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model_state"
],
"from": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.state"
},
{
"to": [
"visualisation.physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model_summary"
],
"from": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model_trajectory"
],
"from": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model_variable_labels"
],
"from": "physiology_cellml_cooling_hunter_crampin_2007_coolinghuntercrampin2007_model.variable_labels"
}
],
"package": "cooling2007-modeling-hypertrophic-ip3-transients-cardiac-myocyte",
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.1",
"description": "Source-faithful physiology lab for Cooling, Hunter, Crampin, 2007. Public controls and outputs are mapped to real source symbols for electrophysiology.",
"schema_version": "2.0"
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