About lab
Source-faithful physiology lab for HH Sodium Current model for estimation task. Public controls and outputs are mapped to real source symbols for electrophysiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagephysiome-4e9-hh-sodium-current-estimation-task-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_sodium_h_gate",
"label": "Initial Sodium H Gate",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.initial_sodium_h_gate",
"description": "Initial value for Sodium H Gate. Maps to source symbol `h`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
},
{
"name": "initial_sodium_m_gate",
"label": "Initial Sodium M Gate",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.initial_sodium_m_gate",
"description": "Initial value for Sodium M Gate. Maps to source symbol `m`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.variable_labels"
},
{
"name": "membrane_voltage",
"label": "Membrane Voltage",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.membrane_voltage",
"description": "Membrane Voltage. Maps to source symbol `V`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "sodium_current",
"label": "Sodium Current",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.sodium_current",
"description": "Sodium Current. Maps to source symbol `i_Na`. Units: microA_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "sodium_h_gate",
"label": "Sodium H Gate",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.sodium_h_gate",
"description": "Sodium H Gate. Maps to source symbol `h`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "sodium_m_gate",
"label": "Sodium M Gate",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.sodium_m_gate",
"description": "Sodium M Gate. Maps to source symbol `m`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "alpha_h",
"label": "Alpha H",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.alpha_h",
"description": "Alpha H. Maps to source symbol `alpha_h`. Units: per_millisec. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "alpha_m",
"label": "Alpha M",
"maps_to": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.alpha_m",
"description": "Alpha M. Maps to source symbol `alpha_m`. Units: per_millisec. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Physiome 4e9 - Hh Sodium Current Estimation Task Lab",
"models": [
{
"path": "owned/models/physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model",
"alias": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model",
"parameters": {
"model_path": "data/sodium_ion_channel.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model_state"
],
"from": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.state"
},
{
"to": [
"visualisation.physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model_summary"
],
"from": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model_trajectory"
],
"from": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model_variable_labels"
],
"from": "physiology_cellml_hh_sodium_current_model_for_estimation_task_4e9_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for HH Sodium Current model for estimation task. Public controls and outputs are mapped to real source symbols for electrophysiology.",
"schema_version": "2.0"
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