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Dudziuk2019 Hsp70 Heat Induction Lab

About lab

Hsp70 heat-shock induction. This is a mathematical model of Hsp70 induction. To model heat shock effects, the model incorporates temperature dependencies in transcirption to Hsp70 mRNA and in dissociation of transcriptional comp.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagedudziuk2019-hsp70-heat-induction-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "heat_shock_protein",
        "maps_to": "dudziuk2019_hsp70_heat_induction.heat_shock_protein"
      },
      {
        "name": "heat_shock_factor",
        "maps_to": "dudziuk2019_hsp70_heat_induction.heat_shock_factor"
      },
      {
        "name": "hsp70_messenger_rna",
        "maps_to": "dudziuk2019_hsp70_heat_induction.hsp70_messenger_rna"
      },
      {
        "name": "protein_product",
        "maps_to": "dudziuk2019_hsp70_heat_induction.protein_product"
      },
      {
        "name": "state",
        "maps_to": "dudziuk2019_hsp70_heat_induction.state"
      },
      {
        "name": "summary",
        "maps_to": "dudziuk2019_hsp70_heat_induction.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "dudziuk2019_hsp70_heat_induction.species_labels"
      }
    ]
  },
  "title": "Dudziuk2019 Hsp70 Heat Induction Lab",
  "models": [
    {
      "path": "owned/models/dudziuk2019_hsp70_heat_induction",
      "alias": "dudziuk2019_hsp70_heat_induction",
      "parameters": {
        "model_path": "data/BIOMD0000000843.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/dudziuk2019_hsp70_heat_induction"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_heat_shock_protein"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.heat_shock_protein"
    },
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_heat_shock_factor"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.heat_shock_factor"
    },
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_hsp70_messenger_rna"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.hsp70_messenger_rna"
    },
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_protein_product"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.protein_product"
    },
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_state"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.state"
    },
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_summary"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.summary"
    },
    {
      "to": [
        "visualisation.dudziuk2019_hsp70_heat_induction_species_labels"
      ],
      "from": "dudziuk2019_hsp70_heat_induction.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Hsp70 heat-shock induction. This is a mathematical model of Hsp70 induction. To model heat shock effects, the model incorporates temperature dependencies in transcirption to Hsp70 mRNA and in dissociation of transcriptional comp.",
  "schema_version": "2.0"
}

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