About lab
Source-faithful physiology lab for Kholodenko, Demin, Moehren, Hoek, 1999. Public controls and outputs are mapped to real source symbols for signalling physiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagekholodenko1999-quantification-short-term-signaling-by-epi-kholod
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
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{
"name": "initial_concentration_g_s",
"label": "Initial Concentration G S (source G_S)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.initial_concentration_g_s",
"description": "Initial value for Concentration G S (source G_S). Maps to source symbol `G_S`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state.",
"accepted_units": [
"nanomolar"
]
},
{
"name": "initial_concentration_r",
"label": "Initial Concentration R (source R)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.initial_concentration_r",
"description": "Initial value for Concentration R (source R). Maps to source symbol `R`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state.",
"accepted_units": [
"nanomolar"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.state"
},
{
"name": "summary",
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"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.summary"
},
{
"name": "trajectory",
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"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.trajectory"
},
{
"name": "variable_labels",
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"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.variable_labels"
},
{
"name": "concentration_g_s",
"label": "Concentration G S (source G_S)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.concentration_g_s",
"description": "Concentration G S (source G_S). Maps to source symbol `G_S`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
},
{
"name": "concentration_r",
"label": "Concentration R (source R)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.concentration_r",
"description": "Concentration R (source R). Maps to source symbol `R`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
},
{
"name": "concentration_r2",
"label": "Concentration R2 (source R2)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.concentration_r2",
"description": "Concentration R2 (source R2). Maps to source symbol `R2`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
},
{
"name": "concentration_r_g",
"label": "Concentration R G (source R_G)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.concentration_r_g",
"description": "Concentration R G (source R_G). Maps to source symbol `R_G`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
},
{
"name": "concentration_r_pl",
"label": "Concentration R Pl (source R_PL)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.concentration_r_pl",
"description": "Concentration R Pl (source R_PL). Maps to source symbol `R_PL`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
},
{
"name": "concentration_r_sh",
"label": "Concentration R Sh (source R_Sh)",
"maps_to": "physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model.concentration_r_sh",
"description": "Concentration R Sh (source R_Sh). Maps to source symbol `R_Sh`. Units: nanomolar. Naming evidence: amount concentration units identify a concentration state."
}
]
},
"title": "Kholodenko1999 - Quantification Short Term Signaling By Epi Kholodenkodemi Lab",
"models": [
{
"path": "owned/models/physiology_cellml_kholodenko_demin_moehren_hoek_1999_kholodenkodeminmoehrenhoek1999_model",
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"parameters": {
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"provenance": {
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"alias": "visualisation",
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"wiring": [
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"runtime": {
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"settle_steps": 1,
"initial_inputs": {},
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},
"description": "Source-faithful physiology lab for Kholodenko, Demin, Moehren, Hoek, 1999. Public controls and outputs are mapped to real source symbols for signalling physiology.",
"schema_version": "2.0"
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