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Nikolov2020 P53 Mir34 Lab

About lab

Svetoslav Nikolov, Olaf Wolkenhauer, Julio Vera & Momchil Nenov. The role of cooperativity in a p53-miR34 dynamical mathematical model.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagenikolov2020-p53-mir34-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_mi_r34a",
        "label": "Initial Mi R34a",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.initial_mi_r34a",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `miR34a`."
      },
      {
        "name": "initial_t_fp53",
        "label": "Initial T Fp53",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.initial_t_fp53",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `TFp53`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.species_labels"
      },
      {
        "name": "mi_r34a",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.mi_r34a"
      },
      {
        "name": "t_fp53",
        "maps_to": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.t_fp53"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Nikolov2020 P53 Mir34 Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model",
      "alias": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model_state"
      ],
      "from": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model_summary"
      ],
      "from": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model_species_labels"
      ],
      "from": "systemsbiology_sbml_nikolov2020_p53_mir34_model_biomd0000001057_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Svetoslav Nikolov, Olaf Wolkenhauer, Julio Vera & Momchil Nenov. The role of cooperativity in a p53-miR34 dynamical mathematical model.",
  "schema_version": "2.0"
}

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