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Owen1998 - tumour growth model Lab

About lab

Owen1998 - tumour growth model Deterministic model for the early,avascular growth of a tumour, concentrating on the inhibitoryeffect of macrophages. This model is described in the article: Modelling t.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packageowen1998-tumour-growth-model-lab
Created2026-05-16
Updated2026-05-16
angiogenesisbiomodels_ebicuratedfaithfulimmunologyimmunotherapymicroenvironmentoncologyphysiologysbmlsystemsbiologytumor-growthvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_macrophage",
        "label": "Macrophage",
        "units": "native SBML value",
        "default": 0.0999999999999985,
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.initial_macrophage",
        "description": "Initial Macrophage. Sets the initial value of bundled SBML symbol `l`."
      },
      {
        "name": "initial_normal_cells",
        "label": "Normal Cells",
        "units": "native SBML value",
        "default": 0.899999999999988,
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.initial_normal_cells",
        "description": "Initial Normal Cells. Sets the initial value of bundled SBML symbol `n`."
      },
      {
        "name": "initial_mutated_cells",
        "label": "Mutated Cells",
        "units": "native SBML value",
        "default": 0.899999999999988,
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.initial_mutated_cells",
        "description": "Initial Mutated Cells. Sets the initial value of bundled SBML symbol `m`."
      }
    ],
    "outputs": [
      {
        "name": "macrophage",
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.macrophage",
        "description": "Macrophage observable. Maps to SBML symbol `l`."
      },
      {
        "name": "normal_cells",
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.normal_cells",
        "description": "Normal Cells observable. Maps to SBML symbol `n`."
      },
      {
        "name": "mutated_cells",
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.mutated_cells",
        "description": "Mutated Cells observable. Maps to SBML symbol `m`."
      },
      {
        "name": "state",
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.state",
        "description": "Full raw SBML observable record for reproducibility and downstream visualisation."
      },
      {
        "name": "summary",
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.summary",
        "description": "Change and peak summary across the simulated SBML observables."
      },
      {
        "name": "species_labels",
        "maps_to": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.species_labels",
        "description": "Mapping from selected raw SBML observable symbols to display labels."
      }
    ]
  },
  "tags": [
    "angiogenesis",
    "biomodels_ebi",
    "curated",
    "faithful",
    "immunology",
    "immunotherapy",
    "microenvironment",
    "oncology",
    "physiology",
    "sbml",
    "systemsbiology",
    "tumor-growth"
  ],
  "title": "Owen1998 - tumour growth model Lab",
  "models": [
    {
      "path": "owned/models/oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model",
      "alias": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model",
      "provenance": {
        "owned_path": "owned/models/oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model_state"
      ],
      "from": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.state"
    },
    {
      "to": [
        "visualisation.oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model_summary"
      ],
      "from": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.summary"
    },
    {
      "to": [
        "visualisation.oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model_species_labels"
      ],
      "from": "oncology_sbml_owen1998_tumour_growth_model_biomd0000000670_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Owen1998 - tumour growth model Deterministic model for the early,avascular growth of a tumour, concentrating on the inhibitoryeffect of macrophages. This model is described in the article: Modelling t.",
  "schema_version": "2.0"
}

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