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Stone1996 Activation Of Soluble Guanylate Cyclase By Nitric Oxide Lab

About lab

Stone1996 - activation of soluble guanylatecyclase by nitric oxide This features the two step binding ofNO to soluble Guanylyl Cyclase as proposed by StoneJR, Marletta MA. It can be used to explore systemsbiology stone1996 activation of soluble guanylate dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagestone1996-activation-of-soluble-guanylate-cyclase-by-nitric-oxid
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_no",
        "label": "Initial Model State No",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.initial_model_state_no",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NO`."
      },
      {
        "name": "initial_sg_cslow",
        "label": "Initial Sg Cslow",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.initial_sg_cslow",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `sGCslow`."
      },
      {
        "name": "initial_sg_cfast",
        "label": "Initial Sg Cfast",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.initial_sg_cfast",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `sGCfast`."
      },
      {
        "name": "initial_sgc_inact_tot",
        "label": "Initial Sgc Inact Tot",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.initial_sgc_inact_tot",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `sGC_inact_tot`."
      },
      {
        "name": "initial_no_sg_cslow_6coord_no_int",
        "label": "Initial No Sg Cslow 6coord No Int",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.initial_no_sg_cslow_6coord_no_int",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NO_sGCslow_6coord_NO_int`."
      },
      {
        "name": "initial_no_sg_cslow_6coord",
        "label": "Initial No Sg Cslow 6coord",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.initial_no_sg_cslow_6coord",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NO_sGCslow_6coord`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.species_labels"
      },
      {
        "name": "model_state_no",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.model_state_no"
      },
      {
        "name": "sg_cslow",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.sg_cslow"
      },
      {
        "name": "sg_cfast",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.sg_cfast"
      },
      {
        "name": "sgc_inact_tot",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.sgc_inact_tot"
      },
      {
        "name": "no_sg_cslow_6coord_no_int",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.no_sg_cslow_6coord_no_int"
      },
      {
        "name": "no_sg_cslow_6coord",
        "maps_to": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.no_sg_cslow_6coord"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Stone1996 Activation Of Soluble Guanylate Cyclase By Nitric Oxide Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model",
      "alias": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model_state"
      ],
      "from": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model_summary"
      ],
      "from": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model_species_labels"
      ],
      "from": "systemsbiology_sbml_stone1996_activation_of_soluble_guanylate_cyclas_biomd0000000198_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Stone1996 - activation of soluble guanylatecyclase by nitric oxide This features the two step binding ofNO to soluble Guanylyl Cyclase as proposed by StoneJR, Marletta MA. It can be used to explore systemsbiology stone1996 activation of soluble guanylate dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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