Hatakeyama2003 - Kimura Naka Kawasaki Yumoto Ichikawa Kim Saito Saeki Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_akt_pip3",
        "label": "Initial Akt Pip3",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.initial_akt_pip3",
        "description": "Initial value for Akt Pip3. Maps to source symbol `Akt_PIP3`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "nm"
        ]
      },
      {
        "name": "initial_pip3",
        "label": "Initial Pip3",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.initial_pip3",
        "description": "Initial value for Pip3. Maps to source symbol `PIP3`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "nm"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.variable_labels"
      },
      {
        "name": "akt_pip3",
        "label": "Akt Pip3",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.akt_pip3",
        "description": "Akt Pip3. Maps to source symbol `Akt_PIP3`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "pip3",
        "label": "Pip3",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.pip3",
        "description": "Pip3. Maps to source symbol `PIP3`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt",
        "label": "Akt",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.akt",
        "description": "Akt. Maps to source symbol `Akt`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_p",
        "label": "Akt P",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.akt_p",
        "description": "Akt P. Maps to source symbol `P`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_pip",
        "label": "Akt Pip",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.akt_pip",
        "description": "Akt Pip. Maps to source symbol `Akt_PIP`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "akt_pipp",
        "label": "Akt Pipp",
        "maps_to": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.akt_pipp",
        "description": "Akt Pipp. Maps to source symbol `Akt_PIPP`. Units: nm. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Hatakeyama2003 - Kimura Naka Kawasaki Yumoto Ichikawa Kim Saito Saeki Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model",
      "alias": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model",
      "parameters": {
        "model_path": "data/hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_kim_saito_saeki_shirouzu_yokoyama_konagaya_2003.cell",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model_state"
      ],
      "from": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model_summary"
      ],
      "from": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model_trajectory"
      ],
      "from": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model_variable_labels"
      ],
      "from": "physiology_cellml_hatakeyama_kimura_naka_kawasaki_yumoto_ichikawa_hatakeyamakimuranakakawasakiyumotoichikawakimsaitosaekishirouzuyokoyamakonagaya2003_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Hatakeyama, Kimura, Naka, Kawasaki, Yumoto, Ichikawa, Kim, Saito, Saeki, Shirouzu, Yokoyama, Konagaya, 2003. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}