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Proctor2011 Proteinhomeostasis Normalcondition Lab

About lab

This model is from the article: Modelling the Role of the Hsp70/Hsp90 System in the Maintenance of Protein Homeostasis Proctor CJ, Lorimer IAJ PLoS ONE 2011; 6(7): e22038. It can be used to explore systemsbiology proctor2011 proteinhomeostasis normalcondition BioModels0000000344 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packageproctor2011-proteinhomeostasis-normalcondition-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_nat_p",
        "label": "Initial Nat P",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.initial_nat_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NatP`."
      },
      {
        "name": "initial_model_state_atp",
        "label": "Initial Model State ATP",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.initial_model_state_atp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ATP`."
      },
      {
        "name": "initial_model_state_adp",
        "label": "Initial Model State ADP",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.initial_model_state_adp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ADP`."
      },
      {
        "name": "initial_pi_death",
        "label": "Initial Pi Death",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.initial_pi_death",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PIDeath`."
      },
      {
        "name": "initial_p38_death",
        "label": "Initial P38 Death",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.initial_p38_death",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p38Death`."
      },
      {
        "name": "initial_jnk_death",
        "label": "Initial Jnk Death",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.initial_jnk_death",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `JNKDeath`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.species_labels"
      },
      {
        "name": "nat_p",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.nat_p"
      },
      {
        "name": "atp",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.atp"
      },
      {
        "name": "adp",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.adp"
      },
      {
        "name": "pi_death",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.pi_death"
      },
      {
        "name": "p38_death",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.p38_death"
      },
      {
        "name": "jnk_death",
        "maps_to": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.jnk_death"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Proctor2011 Proteinhomeostasis Normalcondition Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model",
      "alias": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model_state"
      ],
      "from": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model_summary"
      ],
      "from": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model_species_labels"
      ],
      "from": "systemsbiology_sbml_proctor2011_proteinhomeostasis_normalcondition_biomd0000000344_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is from the article: Modelling the Role of the Hsp70/Hsp90 System in the Maintenance of Protein Homeostasis Proctor CJ, Lorimer IAJ PLoS ONE 2011; 6(7): e22038. It can be used to explore systemsbiology proctor2011 proteinhomeostasis normalcondition BioModels0000000344 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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