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Lewkiewics2019 - effects of aging on naive T cell populations and diversity Lab

About lab

This model is built by COPASI 4.24(Build197), based on paper:A mathematical model of the effects of aging on naive T-cell population and diversityAuthors:Stephanie Lewkiewicz, Yao-li Chuang, Tom ChouA. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagelewkiewics2019-effects-of-aging-on-naive-t-cell-populations-and
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_naive_t_cells_n",
        "label": "Initial Naive T Cells N",
        "units": "native source value",
        "default": 1,
        "maps_to": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.initial_naive_t_cells_n",
        "description": "Initial Naive T Cells N. Sets the initial value of bundled SBML species `N`."
      }
    ],
    "outputs": [
      {
        "name": "naive_t_cells_n",
        "maps_to": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.naive_t_cells_n"
      },
      {
        "name": "unresolved_immune_observable_1",
        "maps_to": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.unresolved_immune_observable_1"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.species_labels"
      }
    ]
  },
  "title": "Lewkiewics2019 - effects of aging on naive T cell populations and diversity Lab",
  "models": [
    {
      "path": "owned/models/immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model",
      "alias": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model",
      "provenance": {
        "owned_path": "owned/models/immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model_state"
      ],
      "from": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model_summary"
      ],
      "from": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model_species_labels"
      ],
      "from": "immunology_sbml_lewkiewics2019_effects_of_aging_on_naive_t_cell_biomd0000000824_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "This model is built by COPASI 4.24(Build197), based on paper:A mathematical model of the effects of aging on naive T-cell population and diversityAuthors:Stephanie Lewkiewicz, Yao-li Chuang, Tom ChouA. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}

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