Martinov2000 - Martinov Vitvitsky Mosharov Banerjee Ataullakhan Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_adenosine",
        "label": "Initial Adenosine",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.initial_adenosine",
        "description": "Initial value for Adenosine. Maps to source symbol `AdoMet`. Units: micromolar. Naming evidence: source metadata names `AdoMet` as `adenosine`.",
        "accepted_units": [
          "micromolar"
        ]
      },
      {
        "name": "initial_s_adenosylhomocysteine",
        "label": "Initial S Adenosylhomocysteine",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.initial_s_adenosylhomocysteine",
        "description": "Initial value for S Adenosylhomocysteine. Maps to source symbol `AdoHcy`. Units: micromolar. Naming evidence: source metadata names `AdoHcy` as `S-adenosylhomocysteine`.",
        "accepted_units": [
          "micromolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.variable_labels"
      },
      {
        "name": "adenosine",
        "label": "Adenosine",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.adenosine",
        "description": "Adenosine. Maps to source symbol `AdoMet`. Units: micromolar. Naming evidence: source metadata names `AdoMet` as `adenosine`."
      },
      {
        "name": "s_adenosylhomocysteine",
        "label": "S Adenosylhomocysteine",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.s_adenosylhomocysteine",
        "description": "S Adenosylhomocysteine. Maps to source symbol `AdoHcy`. Units: micromolar. Naming evidence: source metadata names `AdoHcy` as `S-adenosylhomocysteine`."
      },
      {
        "name": "ado",
        "label": "Ado",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.ado",
        "description": "Ado. Maps to source symbol `Ado`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha_d",
        "label": "Alpha D",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.alpha_d",
        "description": "Alpha D. Maps to source symbol `alpha_d`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "hcy",
        "label": "Hcy",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.hcy",
        "description": "Hcy. Maps to source symbol `Hcy`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ki_gnmt",
        "label": "Ki Gnmt",
        "maps_to": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.ki_gnmt",
        "description": "Ki Gnmt. Maps to source symbol `Ki_GNMT`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Martinov2000 - Martinov Vitvitsky Mosharov Banerjee Ataullakhan Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model",
      "alias": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model",
      "parameters": {
        "model_path": "data/martinov_vitvitsky_mosharov_banerjee_ataullakhanov_2000.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model_state"
      ],
      "from": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model_summary"
      ],
      "from": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model_trajectory"
      ],
      "from": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model_variable_labels"
      ],
      "from": "physiology_cellml_martinov_vitvitsky_mosharov_banerjee_ataullakhan_martinovvitvitskymosharovbanerjeeataullakhanov2000_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Martinov, Vitvitsky, Mosharov, Banerjee, Ataullakhanov, 2000. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}