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Hilgemann1987 Calciumtransients Lab

About lab

This a model from the article: Excitation-contraction coupling and extracellular calcium transients in rabbitatrium: reconstruction of basic cellular mechanisms. It can be used to explore systemsbiology hilgemann1987 calciumtransients model0848444339 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagehilgemann1987-calciumtransients-lab
Created2026-05-17
Updated2026-05-17
physiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_v_membrane",
        "label": "Initial V Membrane",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_v_membrane",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `V_membrane`."
      },
      {
        "name": "initial_prod_frac",
        "label": "Initial Prod Frac",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_prod_frac",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ProdFrac`."
      },
      {
        "name": "initial_na_i",
        "label": "Initial Na I",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_na_i",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Na_i`."
      },
      {
        "name": "initial_model_state_k_i",
        "label": "Initial Model State K I",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_model_state_k_i",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `K_i`."
      },
      {
        "name": "initial_f_ca",
        "label": "Initial F Ca",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_f_ca",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `f_Ca`."
      },
      {
        "name": "initial_ca_up",
        "label": "Initial Ca Up",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.initial_ca_up",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Ca_up`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.species_labels"
      },
      {
        "name": "v_membrane",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.v_membrane"
      },
      {
        "name": "prod_frac",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.prod_frac"
      },
      {
        "name": "na_i",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.na_i"
      },
      {
        "name": "k_i",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.k_i"
      },
      {
        "name": "f_ca",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.f_ca"
      },
      {
        "name": "ca_up",
        "maps_to": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.ca_up"
      }
    ]
  },
  "tags": [
    "physiology",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Hilgemann1987 Calciumtransients Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model",
      "alias": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model_state"
      ],
      "from": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model_summary"
      ],
      "from": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model_species_labels"
      ],
      "from": "systemsbiology_sbml_hilgemann1987_calciumtransients_model0848444339_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This a model from the article: Excitation-contraction coupling and extracellular calcium transients in rabbitatrium: reconstruction of basic cellular mechanisms. It can be used to explore systemsbiology hilgemann1987 calciumtransients model0848444339 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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